RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FXYD7P58549 80 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 RAB31Q13636 194 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 OXA1LQ15070 435 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 C12orf74Q32Q52 190 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 SPATA31B1PQ5VZV4 182 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF767PQ75MW2 155 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 OR1L4Q8NGR5 311 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 SAT2Q96F10 170 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 ATP5SQ99766 215 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 WDR61Q9GZS3 305 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 SLC35B3Q9H1N7 401 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 WFDC1Q9HC57 220 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 DNAJC4Q9NNZ3 241 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 RPRMQ9NS64 109 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 XCL2Q9UBD3 114 aa5.67□□□□□ -1.5
CDC42BPA-210ENST00000462553 G3V3Q6 166 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 H3BQ15 152 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 H3BTX0 84 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF705DP0CH99 300 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF705BP0CI00 300 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 RPL12P30050 165 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 FGL1Q08830 312 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 Q5BKY6 102 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 FAM78BQ5VT40 261 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 LCN15Q6UWW0 184 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF705AQ6ZN79 300 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 S100A7AQ86SG5 101 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 BPIFA4PQ86YQ2 179 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 POM121L12Q8N7R1 296 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 FAM167A-AS1Q96KT0 104 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 PFDN5Q99471 154 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 MED28Q9H204 178 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF331Q9NQX6 463 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 RFNGQ9Y644 331 aa5.66□□□□□ -1.5
CDC42BPA-210ENST00000462553 DEFB131BA0A096LNP1 70 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 PRSS29PA6NIE9 313 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF705FA8MVS1 300 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 PRAC2D3DTV9 90 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 CRXO43186 299 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 GIPP09681 153 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 PYYP10082 97 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 CNN1P51911 297 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 PSG9Q00887 426 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 PSG3Q16557 428 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 RGS21Q2M5E4 152 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 EBLN2Q6P2I7 272 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 Q6ZRG5 221 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 MIR17HGQ75NE6 70 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF738Q8NE65 137 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 OR4B1Q8NGF8 309 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 SLC50A1Q9BRV3 221 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 SLC25A2Q9BXI2 301 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 PARD6GQ9BYG4 376 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 SMIM3Q9BZL3 60 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 ZNF586Q9NXT0 402 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 RNF24Q9Y225 148 aa5.65□□□□□ -1.5
CDC42BPA-210ENST00000462553 M0R2N4 97 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 ZNF253O75346 499 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 NDUFB4O95168 129 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 P0DMU3 169 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 FAM231AP0DMU4 169 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 FAM231CP0DMU5 169 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 NUTF2P61970 127 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 LGALS9BQ3B8N2 356 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 Q6ZR54 194 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 C1orf158Q8N1D5 194 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 OR8A1Q8NGG7 326 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 ZNF503Q96F45 646 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 AQP10Q96PS8 301 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 NEU1Q99519 415 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 C1QTNF4Q9BXJ3 329 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 TMEM14CQ9P0S9 112 aa5.64□□□□□ -1.51
CDC42BPA-210ENST00000462553 TRBV19A0A075B6N1 114 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 RNF222A6NCQ9 220 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 M0R2Z0 102 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 DUSP14O95147 198 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 HIST1H1AQ02539 215 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 SPINK13Q1W4C9 94 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 FFAR4Q5NUL3 377 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 ZNF575Q86XF7 245 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 BAP18Q8IXM2 172 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 ASB13Q8WXK3 278 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 RPUSD4Q96CM3 377 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 IGF2BP2-AS1Q96M15 143 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 NDUFAF3Q9BU61 184 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 SSBP4Q9BWG4 385 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 KCNIP2Q9NS61 270 aa5.63□□□□□ -1.51
CDC42BPA-210ENST00000462553 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 BOLA2-SMG1P6H3BVE0 249 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 M0R3E3 92 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 EIF3GO75821 320 aaKnown RBP eCLIP5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 IFNA5P01569 189 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 HIST1H1EP10412 219 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 PDE6HQ13956 83 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 KIR3DS1Q14943 382 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 GUK1Q16774 197 aa5.62□□□□□ -1.51
CDC42BPA-210ENST00000462553 LRRC20Q8TCA0 184 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms