RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 TRBV19A0A075B6N1 114 aa17.17■□□□□ 0.34
SMKR1-201ENST00000462322 ZNF253O75346 499 aa17.17■□□□□ 0.34
SMKR1-201ENST00000462322 IFNA5P01569 189 aa17.17■□□□□ 0.34
SMKR1-201ENST00000462322 PYYP10082 97 aa17.17■□□□□ 0.34
SMKR1-201ENST00000462322 HIST1H1EP10412 219 aaKnown RBP17.17■□□□□ 0.34
SMKR1-201ENST00000462322 TCTAP57738 103 aa17.17■□□□□ 0.34
SMKR1-201ENST00000462322 TIMM9Q9Y5J7 89 aa17.17■□□□□ 0.34
SMKR1-201ENST00000462322 MIR17HGQ75NE6 70 aa17.16■□□□□ 0.34
SMKR1-201ENST00000462322 SCGB1C1Q8TD33 95 aa17.16■□□□□ 0.34
SMKR1-201ENST00000462322 SLC25A2Q9BXI2 301 aa17.16■□□□□ 0.34
SMKR1-201ENST00000462322 DKK2Q9UBU2 259 aa17.16■□□□□ 0.34
SMKR1-201ENST00000462322 DEFB131BA0A096LNP1 70 aa17.15■□□□□ 0.34
SMKR1-201ENST00000462322 TEX48A0A1B0GUV7 120 aa17.15■□□□□ 0.34
SMKR1-201ENST00000462322 ZNF705GA8MUZ8 300 aaPredicted RBP17.15■□□□□ 0.34
SMKR1-201ENST00000462322 FCN2Q15485 313 aa17.15■□□□□ 0.34
SMKR1-201ENST00000462322 FAM222AQ5U5X8 452 aa17.15■□□□□ 0.34
SMKR1-201ENST00000462322 BLNKQ8WV28 456 aa17.15■□□□□ 0.34
SMKR1-201ENST00000462322 YTHDF2Q9Y5A9 579 aaKnown RBP17.15■□□□□ 0.34
SMKR1-201ENST00000462322 CDKN1BP46527 198 aa17.14■□□□□ 0.33
SMKR1-201ENST00000462322 LGALS9CQ6DKI2 356 aa17.14■□□□□ 0.33
SMKR1-201ENST00000462322 RPP25LQ8N5L8 163 aaKnown RBP17.14■□□□□ 0.33
SMKR1-201ENST00000462322 FAM167A-AS1Q96KT0 104 aa17.14■□□□□ 0.33
SMKR1-201ENST00000462322 LINC01587Q99440 93 aa17.14■□□□□ 0.33
SMKR1-201ENST00000462322 MRPL32Q9BYC8 188 aaKnown RBP17.14■□□□□ 0.33
SMKR1-201ENST00000462322 NDUFB4O95168 129 aa17.13■□□□□ 0.33
SMKR1-201ENST00000462322 PRM2P04554 102 aa17.13■□□□□ 0.33
SMKR1-201ENST00000462322 PDE6HQ13956 83 aa17.13■□□□□ 0.33
SMKR1-201ENST00000462322 NIPSNAP3BQ9BS92 247 aa17.13■□□□□ 0.33
SMKR1-201ENST00000462322 APLNQ9ULZ1 77 aa17.13■□□□□ 0.33
SMKR1-201ENST00000462322 FUT9Q9Y231 359 aa17.13■□□□□ 0.33
SMKR1-201ENST00000462322 TSPOP30536 169 aa17.12■□□□□ 0.33
SMKR1-201ENST00000462322 FFAR4Q5NUL3 377 aa17.12■□□□□ 0.33
SMKR1-201ENST00000462322 TMEM256Q8N2U0 113 aa17.12■□□□□ 0.33
SMKR1-201ENST00000462322 MRPL53Q96EL3 112 aaKnown RBP17.12■□□□□ 0.33
SMKR1-201ENST00000462322 PARD6GQ9BYG4 376 aaPredicted RBP17.12■□□□□ 0.33
SMKR1-201ENST00000462322 OR51M1Q9H341 326 aa17.12■□□□□ 0.33
SMKR1-201ENST00000462322 WFDC1Q9HC57 220 aa17.12■□□□□ 0.33
SMKR1-201ENST00000462322 IGHV4-4A0A075B6R2 117 aa17.11■□□□□ 0.33
SMKR1-201ENST00000462322 M0R3E3 92 aa17.11■□□□□ 0.33
SMKR1-201ENST00000462322 PAXXQ9BUH6 204 aa17.11■□□□□ 0.33
SMKR1-201ENST00000462322 AAMDCQ9H7C9 122 aa17.11■□□□□ 0.33
SMKR1-201ENST00000462322 PLA2G2EQ9NZK7 142 aa17.11■□□□□ 0.33
SMKR1-201ENST00000462322 PRELID1Q9Y255 219 aa17.11■□□□□ 0.33
SMKR1-201ENST00000462322 NPIPB6E9PJ23 425 aa17.1■□□□□ 0.33
SMKR1-201ENST00000462322 NBEAP1P0C6P0 100 aa17.1■□□□□ 0.33
SMKR1-201ENST00000462322 EXOC3-AS1Q8N2X6 119 aa17.1■□□□□ 0.33
SMKR1-201ENST00000462322 OR10J4P0C629 311 aa17.09■□□□□ 0.33
SMKR1-201ENST00000462322 CT45A10P0DMU9 189 aa17.09■□□□□ 0.33
SMKR1-201ENST00000462322 HTN1P15515 57 aa17.09■□□□□ 0.33
SMKR1-201ENST00000462322 KIR3DS1Q14943 382 aa17.09■□□□□ 0.33
SMKR1-201ENST00000462322 OR7C2O60412 319 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 AZU1P20160 251 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 LEPP41159 167 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 TAS2R60P59551 318 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 ICAM4Q14773 271 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 RGS21Q2M5E4 152 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 RNF141Q8WVD5 230 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 FXYD5Q96DB9 178 aa17.08■□□□□ 0.32
SMKR1-201ENST00000462322 J3KRW8 73 aa17.07■□□□□ 0.32
SMKR1-201ENST00000462322 DAD1P61803 113 aa17.07■□□□□ 0.32
SMKR1-201ENST00000462322 OXA1LQ15070 435 aa17.07■□□□□ 0.32
SMKR1-201ENST00000462322 GFI1BQ5VTD9 330 aa17.07■□□□□ 0.32
SMKR1-201ENST00000462322 ODF3Q96PU9 254 aa17.07■□□□□ 0.32
SMKR1-201ENST00000462322 C20orf144Q9BQM9 153 aa17.07■□□□□ 0.32
SMKR1-201ENST00000462322 H7BYZ3 331 aa17.06■□□□□ 0.32
SMKR1-201ENST00000462322 GIPP09681 153 aaPredicted RBP17.06■□□□□ 0.32
SMKR1-201ENST00000462322 HTN3P15516 51 aa17.06■□□□□ 0.32
SMKR1-201ENST00000462322 ERCC8Q13216 396 aa17.06■□□□□ 0.32
SMKR1-201ENST00000462322 FAM122CQ6P4D5 195 aa17.06■□□□□ 0.32
SMKR1-201ENST00000462322 LYRM9A8MSI8 78 aa17.05■□□□□ 0.32
SMKR1-201ENST00000462322 TAS2R45P59539 299 aa17.05■□□□□ 0.32
SMKR1-201ENST00000462322 ASB13Q8WXK3 278 aa17.05■□□□□ 0.32
SMKR1-201ENST00000462322 NDUFAF3Q9BU61 184 aa17.05■□□□□ 0.32
SMKR1-201ENST00000462322 UBE2L3P68036 154 aaKnown RBP17.04■□□□□ 0.32
SMKR1-201ENST00000462322 ACOT6Q3I5F7 207 aaPredicted RBP17.04■□□□□ 0.32
SMKR1-201ENST00000462322 KHDC3LQ587J8 217 aa17.04■□□□□ 0.32
SMKR1-201ENST00000462322 Q5BKY6 102 aa17.04■□□□□ 0.32
SMKR1-201ENST00000462322 PHYHIPLQ96FC7 376 aa17.04■□□□□ 0.32
SMKR1-201ENST00000462322 C16orf74Q96GX8 76 aa17.04■□□□□ 0.32
SMKR1-201ENST00000462322 LINC00477Q96M19 166 aa17.04■□□□□ 0.32
SMKR1-201ENST00000462322 AQP10Q96PS8 301 aa17.04■□□□□ 0.32
SMKR1-201ENST00000462322 PLAC8L1A1L4L8 177 aa17.03■□□□□ 0.32
SMKR1-201ENST00000462322 ZNF503Q96F45 646 aa17.03■□□□□ 0.32
SMKR1-201ENST00000462322 AGPAT4-IT1Q9H0P7 198 aa17.03■□□□□ 0.32
SMKR1-201ENST00000462322 TRAV12-3A0A0B4J271 114 aa17.02■□□□□ 0.32
SMKR1-201ENST00000462322 DEFB130BP0DP73 79 aa17.02■□□□□ 0.32
SMKR1-201ENST00000462322 DEFB130AP0DP74 79 aa17.02■□□□□ 0.32
SMKR1-201ENST00000462322 M6PRP20645 277 aa17.02■□□□□ 0.32
SMKR1-201ENST00000462322 ZNF266Q14584 549 aa17.02■□□□□ 0.32
SMKR1-201ENST00000462322 ZNF493Q6ZR52 646 aa17.02■□□□□ 0.32
SMKR1-201ENST00000462322 IGKV2-40A0A087WW87 121 aaPredicted RBP17.01■□□□□ 0.31
SMKR1-201ENST00000462322 A0A1W2PPV4 95 aa17.01■□□□□ 0.31
SMKR1-201ENST00000462322 EIF3GO75821 320 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMKR1-201ENST00000462322 IGKV2D-40P01614 121 aaPredicted RBP17.01■□□□□ 0.31
SMKR1-201ENST00000462322 RANP62826 216 aaKnown RBP17.01■□□□□ 0.31
SMKR1-201ENST00000462322 C9orf47Q6ZRZ4 202 aa17.01■□□□□ 0.31
SMKR1-201ENST00000462322 CCDC28AQ8IWP9 274 aa17.01■□□□□ 0.31
SMKR1-201ENST00000462322 HSD17B11Q8NBQ5 300 aa17.01■□□□□ 0.31
SMKR1-201ENST00000462322 FAM210BQ96KR6 192 aa17.01■□□□□ 0.31
SMKR1-201ENST00000462322 SLC25A5P05141 298 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms