RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CEP290O15078 2479 aa3.85□□□□□ -1.79
EPHA3-202ENST00000452448 J3QRE1 110 aa3.84□□□□□ -1.79
EPHA3-202ENST00000452448 CXCL5P42830 114 aa3.84□□□□□ -1.79
EPHA3-202ENST00000452448 QRFPP83859 136 aa3.84□□□□□ -1.79
EPHA3-202ENST00000452448 CST6Q15828 149 aa3.84□□□□□ -1.79
EPHA3-202ENST00000452448 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
EPHA3-202ENST00000452448 HDHD3Q9BSH5 251 aaPredicted RBP3.84□□□□□ -1.79
EPHA3-202ENST00000452448 FAM60AQ9NP50 221 aa3.84□□□□□ -1.79
EPHA3-202ENST00000452448 PLXNB3Q9ULL4 1909 aa3.84□□□□□ -1.79
EPHA3-202ENST00000452448 IGHV1-58A0A0C4DH39 117 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 WI2-2373I1.2A0A1W2PRP0 233 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 TCRBV4S1A1TA0A5B7 111 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 NCBP2P52298 156 aaKnown RBP eCLIP3.84□□□□□ -1.8
EPHA3-202ENST00000452448 ZNF136P52737 540 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 DAD1P61803 113 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 Q75L30 129 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 OR5C1Q8NGR4 320 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 RFESDQ8TAC1 157 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 COPS9Q8WXC6 57 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 MGST2Q99735 147 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 DCTN5Q9BTE1 182 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 PLA2G12AQ9BZM1 189 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 TTC28Q96AY4 2481 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 UTRNP46939 3433 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 PLXNA2O75051 1894 aa3.84□□□□□ -1.8
EPHA3-202ENST00000452448 PTPRBP23467 1997 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 IGHV1-24A0A0C4DH33 117 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 C4orf51C9J302 202 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 TIMM17BO60830 172 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 IL4P05112 153 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 NSUN5P1Q3KNT7 163 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 LINC00173Q6ZV60 143 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 CHAC1Q9BUX1 264 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 CALYQ9NYX4 217 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 MUC6Q6W4X9 2439 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 FRMD6-AS1P0C7T7 363 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 EGR2P11161 476 aaPredicted RBP3.83□□□□□ -1.8
EPHA3-202ENST00000452448 GP1BBP13224 206 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 CCL8P80075 99 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 ABCA11PQ4W5N1 156 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 SCGB1D4Q6XE38 83 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 Q6ZS49 121 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 ZNF627Q7L945 461 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 TMEM252Q8N6L7 170 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 WFDC6Q9BQY6 131 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 SRXN1Q9BYN0 137 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 TAC3Q9UHF0 121 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 OBSL1O75147 1896 aa3.83□□□□□ -1.8
EPHA3-202ENST00000452448 CPSF4LA6NMK7 179 aaKnown RBP3.82□□□□□ -1.8
EPHA3-202ENST00000452448 LINC01619G3V211 115 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 J3QLW9 94 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 HMGN2P05204 90 aaKnown RBP3.82□□□□□ -1.8
EPHA3-202ENST00000452448 IFI6P09912 130 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 ZNF823P16415 610 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 LGALS3P17931 250 aaKnown RBP3.82□□□□□ -1.8
EPHA3-202ENST00000452448 PCBD1P61457 104 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 CIRBPQ14011 172 aaKnown RBP3.82□□□□□ -1.8
EPHA3-202ENST00000452448 TMEM30BQ3MIR4 351 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 SERP2Q8N6R1 65 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 CNRIP1Q96F85 164 aaPredicted RBP3.82□□□□□ -1.8
EPHA3-202ENST00000452448 COX14Q96I36 57 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 BPTFQ12830 3046 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 PKD1L2Q7Z442 2459 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 DOCK7Q96N67 2140 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 M0R378 163 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 UPK2O00526 184 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 CCL16O15467 120 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 CST7O76096 145 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 RPL30P62888 115 aaKnown RBP3.82□□□□□ -1.8
EPHA3-202ENST00000452448 SLC48A1Q6P1K1 146 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 C4orf45Q96LM5 186 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 TIMM17AQ99595 171 aa3.82□□□□□ -1.8
EPHA3-202ENST00000452448 IGKV1D-43A0A0B4J1Z2 117 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 UBE2L5PA0A1B0GUS4 154 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 SLC25A20O43772 301 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 ZNF73O43830 326 aaPredicted RBP3.81□□□□□ -1.8
EPHA3-202ENST00000452448 SYNJ2BPP57105 145 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 B3GALT5-AS1P59052 145 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 LY6G5CQ5SRR4 150 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 ARL17AQ8IVW1 177 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 NTN5Q8WTR8 489 aaPredicted RBP3.81□□□□□ -1.8
EPHA3-202ENST00000452448 TMEM243Q9BU79 118 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 LINC00474Q9P2X8 69 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 KMT2EQ8IZD2 1858 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 C15orf62A8K5M9 175 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 K7EMI3 77 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 TMEM256-PLSCR3K7ERE1 68 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 PIN1P1O15428 100 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 SUPT4H1P63272 117 aaKnown RBP3.81□□□□□ -1.8
EPHA3-202ENST00000452448 RBM3P98179 157 aaKnown RBP3.81□□□□□ -1.8
EPHA3-202ENST00000452448 PLPP4Q5VZY2 271 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 CCL17Q92583 94 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 Q9H3A6 140 aa3.81□□□□□ -1.8
EPHA3-202ENST00000452448 RAI1Q7Z5J4 1906 aaPredicted RBP3.81□□□□□ -1.8
EPHA3-202ENST00000452448 CISD3P0C7P0 127 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 RNASE2P10153 161 aaKnown RBP3.8□□□□□ -1.8
EPHA3-202ENST00000452448 CCL23P55773 120 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms