RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 RANP62826 216 aaKnown RBP5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 DEFA6Q01524 100 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 ZNF124Q15973 351 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 PSG3Q16557 428 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 TEX261Q6UWH6 196 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 LYPD1Q8N2G4 141 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 EXOC3-AS1Q8N2X6 119 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 MAP1LC3BQ9GZQ8 125 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 WFDC10AQ9H1F0 79 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 TMEM167BQ9NRX6 74 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 CLEC5AQ9NY25 188 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.52
AC004540.1-206ENST00000448056 ZNF705FA8MVS1 300 aaPredicted RBP5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 ZNF705EA8MWA4 302 aaPredicted RBP5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 A8MZ25 164 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 CCL20P78556 96 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 ICAM4Q14773 271 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 DEFB121Q5J5C9 76 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 IQCF2Q8IXL9 164 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 ZNF680Q8NEM1 530 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 Q9H3A6 140 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 TUBA4BQ9H853 241 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 PRELID1Q9Y255 219 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 MEGF8Q7Z7M0 2845 aa5.58□□□□□ -1.52
AC004540.1-206ENST00000448056 A0A1B0GV50 99 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 RBMY1BA6NDE4 496 aaKnown RBP5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 PGPA6NDG6 321 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 RBMY1EA6NEQ0 496 aaKnown RBP5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 KNCNA6PVL3 124 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 F6UB75 175 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 H3BMM0 161 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 IFNA7P01567 189 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 RBMY1DP0C7P1 496 aaKnown RBP5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 DEFB1P60022 68 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 BLOC1S1P78537 153 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 ACTL10Q5JWF8 245 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 GDF5OSQ5U4N7 250 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 EBLN2Q6P2I7 272 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 LINC00322Q6ZN03 302 aaPredicted RBP5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 FOXI2Q6ZQN5 318 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 ZNF738Q8NE65 137 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 RPUSD4Q96CM3 377 aaKnown RBP5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 MRPL53Q96EL3 112 aaKnown RBP5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 SAV1Q9H4B6 383 aaPredicted RBP5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 AAMDCQ9H7C9 122 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 SRD5A3Q9H8P0 318 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 OTORQ9NRC9 128 aa5.57□□□□□ -1.52
AC004540.1-206ENST00000448056 A0A0J9YX75 114 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 A0A1W2PRE2 83 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 FAM74A7A6NL05 159 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 PRAC2D3DTV9 90 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 TEX46H3BTG2 121 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 M0R3E3 92 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 HBE1P02100 147 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 ZNF705DP0CH99 300 aaPredicted RBP5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 ZNF705BP0CI00 300 aaPredicted RBP5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 PRB4P10163 310 aaPredicted RBP5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 HLA-DRB4P13762 266 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 PPT1P50897 306 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 UBE2G2P60604 165 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 SUMO1P63165 101 aaKnown RBP5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 PMS2P11Q13670 270 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 STHQ8IWL8 128 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 OR8A1Q8NGG7 326 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 LYPD6BQ8NI32 183 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 MRAPQ8TCY5 172 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 RXFP4Q8TDU9 374 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 NKX6-2Q9C056 277 aaPredicted RBP5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 YTHDF2Q9Y5A9 579 aaKnown RBP5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 HLA-DRB4X5D2U9 266 aa5.56□□□□□ -1.52
AC004540.1-206ENST00000448056 LOC102724200A0A096LPH7 203 aaPredicted RBP5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 GGTLC3B5MD39 225 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 DIRC3C9JPN6 131 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 PAGE4O60829 102 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 DUSP14O95147 198 aaKnown RBP5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 FRMD6-AS1P0C7T7 363 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 RPL35AP18077 110 aaKnown RBP5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 CSN1S1P47710 185 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 CNN1P51911 297 aaKnown RBP5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 IFITM2Q01629 132 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 KIR3DS1Q14943 382 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 CST9LP1Q5W188 147 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 TRPT1Q86TN4 253 aaKnown RBP5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 ARL6IP6Q8N6S5 226 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 OR4B1Q8NGF8 309 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 OR10J6PQ8NGY7 276 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 CMTM2Q8TAZ6 248 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 CLUHP3Q96NS8 147 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 EPDR1Q9UM22 224 aa5.55□□□□□ -1.52
AC004540.1-206ENST00000448056 KIR2DL5BA0A0G2JN68 375 aa5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 KIR2DL5BA0A0G2JPC4 375 aa5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 A8MTW9 85 aa5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 IGKV3-20P01619 116 aa5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 SLC25A5P05141 298 aaKnown RBP5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 HIST1H1AQ02539 215 aaPredicted RBP5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 ERCC8Q13216 396 aa5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 C9orf47Q6ZRZ4 202 aa5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 CCDC28AQ8IWP9 274 aa5.54□□□□□ -1.52
AC004540.1-206ENST00000448056 KIR2DL5AQ8N109 375 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms