RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 RPUSD1Q9UJJ7 312 aaKnown RBP8.33□□□□□ -1.08
LIN54-202ENST00000442461 PLXNA1Q9UIW2 1896 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 E9PLD3 99 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 LINC01565O15544 149 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 NDUFC2O95298 119 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 GHRHP01286 108 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 DDB2Q92466 427 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 TMEM14BQ9NUH8 114 aa8.33□□□□□ -1.08
LIN54-202ENST00000442461 BRCA1P38398 1863 aaKnown RBP8.33□□□□□ -1.08
LIN54-202ENST00000442461 USF3Q68DE3 2245 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 ZGRF1Q86YA3 2104 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 SOCS3O14543 225 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 IGHV3-23P01764 117 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 CD3EP07766 207 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 COX6A1P12074 109 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 C11orf1Q9H5F2 150 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 CADP27708 2225 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 LTAP01374 205 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 RNASE4P34096 147 aaKnown RBP8.32□□□□□ -1.08
LIN54-202ENST00000442461 FAM120AOSQ5T036 256 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 WDR81Q562E7 1941 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 LTBP4Q8N2S1 1624 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 EFNA4P52798 201 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 PDE6HQ13956 83 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 CR1LQ2VPA4 569 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 C3orf36Q3SXR2 165 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 Q6ZT83 130 aa8.32□□□□□ -1.08
LIN54-202ENST00000442461 ZCCHC24Q8N2G6 241 aaKnown RBP8.32□□□□□ -1.08
LIN54-202ENST00000442461 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
LIN54-202ENST00000442461 FER1L5A0AVI2 2057 aa8.31□□□□□ -1.08
LIN54-202ENST00000442461 CECR9P0C854 216 aa8.31□□□□□ -1.08
LIN54-202ENST00000442461 C14orf178Q8N769 122 aaPredicted RBP8.31□□□□□ -1.08
LIN54-202ENST00000442461 TRAV13-1A0A0B4J241 112 aa8.31□□□□□ -1.08
LIN54-202ENST00000442461 CLPSP04118 112 aa8.31□□□□□ -1.08
LIN54-202ENST00000442461 CCL3L1P16619 93 aa8.31□□□□□ -1.08
LIN54-202ENST00000442461 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
LIN54-202ENST00000442461 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
LIN54-202ENST00000442461 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
LIN54-202ENST00000442461 J3QQQ9 107 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 CD7P09564 240 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 FXYD5Q96DB9 178 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 IMMP1LQ96LU5 166 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 A0A1B0GX51 115 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 DOCK7Q96N67 2140 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 SRRM5B3KS81 715 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 ATP5G1P05496 136 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 SMIM2Q9BVW6 85 aa8.3□□□□□ -1.08
LIN54-202ENST00000442461 UQCRQO14949 82 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 DEFB109BQ30KR1 87 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 ZNF407Q9C0G0 2248 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 SPTAN1Q13813 2472 aaKnown RBP8.29□□□□□ -1.08
LIN54-202ENST00000442461 IGLV3-1P01715 115 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 SHANK2-AS3Q9BTD1 123 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 TP53TG1Q9Y2A0 90 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 IGLV3-12A0A075B6K2 115 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 TMEM141Q96I45 108 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 IGKV3-20P01619 116 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 ZNF493Q6ZR52 646 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 IGF2BP2-AS1Q96M15 143 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 HES7Q9BYE0 225 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 DPM3Q9P2X0 92 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 PEMTQ9UBM1 199 aa8.29□□□□□ -1.08
LIN54-202ENST00000442461 TANC1Q9C0D5 1861 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 M0QXV9 152 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 ZNF474Q6S9Z5 364 aaPredicted RBP8.28□□□□□ -1.08
LIN54-202ENST00000442461 UBL5Q9BZL1 73 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 METRNQ9UJH8 293 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 TRBV19A0A075B6N1 114 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 C16orf97H3BN30 126 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 RS1O15537 224 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 ZNF876PQ49A33 203 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 RNF114Q9Y508 228 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 SRD5A1P18405 259 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 DTX2Q86UW9 622 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 MAFAQ8NHW3 353 aaPredicted RBP8.28□□□□□ -1.08
LIN54-202ENST00000442461 TMEM243Q9BU79 118 aa8.28□□□□□ -1.08
LIN54-202ENST00000442461 LEPROTO15243 131 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 SNRPD3P62318 126 aaKnown RBP8.27□□□□□ -1.09
LIN54-202ENST00000442461 COLCA1Q6ZS62 124 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 C8orf49Q96NF6 230 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 TM2D2Q9BX73 214 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 DYSFO75923 2080 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 IGKV1-16P04430 117 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 FOXG1P55316 489 aaPredicted RBP8.27□□□□□ -1.09
LIN54-202ENST00000442461 RSPO1Q2MKA7 263 aaPredicted RBP8.27□□□□□ -1.09
LIN54-202ENST00000442461 DUX5Q96PT3 197 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 FAM110AQ9BQ89 295 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 VWC2LB2RUY7 222 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 TMEM86BQ8N661 226 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 CD177Q8N6Q3 437 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 ZNF524Q96C55 264 aa8.27□□□□□ -1.09
LIN54-202ENST00000442461 UFSP1Q6NVU6 142 aa8.26□□□□□ -1.09
LIN54-202ENST00000442461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.26□□□□□ -1.099e-8■■■■■ 29.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms