RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CCDC32Q9BV29 185 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 UQCC1Q9NVA1 299 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 FLVCR2Q9UPI3 526 aa5.53□□□□□ -1.52
CD44-211ENST00000442151 TRAV8-2A0A0B4J237 113 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 FAM25EA8MYX2 175 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 LYRM1O43325 122 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 ZNF253O75346 499 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 MPDU1O75352 247 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 IL7P13232 177 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 CAMLGP49069 296 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 SLC38A11Q08AI6 406 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 CLINT1Q14677 625 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 TMEM88Q6PEY1 159 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 ODF3Q96PU9 254 aa5.52□□□□□ -1.53
CD44-211ENST00000442151 RBM38Q9H0Z9 239 aaKnown RBP5.52□□□□□ -1.53
CD44-211ENST00000442151 GPN1Q9HCN4 374 aaPredicted RBP5.52□□□□□ -1.53
CD44-211ENST00000442151 RCL1Q9Y2P8 373 aaKnown RBP5.52□□□□□ -1.53
CD44-211ENST00000442151 FAM240BA0A1B0GVZ2 78 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 SNURFLB1AK76 121 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 F5H768 121 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 M0R2Z0 102 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 MBPP02686 304 aaPredicted RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 TCRBP04435 133 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 DEFB130BP0DP73 79 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 DEFB130AP0DP74 79 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 CAV2P51636 162 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 DEFB1P60022 68 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 TMEM263Q8WUH6 116 aaKnown RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 S100ZQ8WXG8 99 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 MRPL53Q96EL3 112 aaKnown RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 SLC25A31Q9H0C2 315 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 ZNF331Q9NQX6 463 aaPredicted RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 KCNIP2Q9NS61 270 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 LSM5Q9Y4Y9 91 aaKnown RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 C7orf66A4D0T2 115 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 M0R2N4 97 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 CRXO43186 299 aaPredicted RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 MED14OSP0DP75 135 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 RPL29P47914 159 aaKnown RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 CYCSP99999 105 aaKnown RBP5.51□□□□□ -1.53
CD44-211ENST00000442151 RNF182Q8N6D2 247 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 ZNF503Q96F45 646 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 LINC00477Q96M19 166 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 PYGO2Q9BRQ0 406 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 TIMM9Q9Y5J7 89 aa5.51□□□□□ -1.53
CD44-211ENST00000442151 NUDT3O95989 172 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 HIST1H1EP10412 219 aaKnown RBP5.5□□□□□ -1.53
CD44-211ENST00000442151 HTN1P15515 57 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 SULT1A1P50225 295 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 IGFL4Q6B9Z1 124 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 PATE2Q6UY27 113 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 NRARPQ7Z6K4 114 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 ZNF680Q8NEM1 530 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 UHRF2Q96PU4 802 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 AAMDCQ9H7C9 122 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 WDR83OSQ9Y284 106 aa5.5□□□□□ -1.53
CD44-211ENST00000442151 H3BNG1 76 aa5.49□□□□□ -1.53
CD44-211ENST00000442151 SLC25A5P05141 298 aaKnown RBP5.49□□□□□ -1.53
CD44-211ENST00000442151 BAXQ07812 192 aa5.49□□□□□ -1.53
CD44-211ENST00000442151 PDE6HQ13956 83 aa5.49□□□□□ -1.53
CD44-211ENST00000442151 TTC32Q5I0X7 151 aa5.49□□□□□ -1.53
CD44-211ENST00000442151 MGST2Q99735 147 aa5.49□□□□□ -1.53
CD44-211ENST00000442151 TMEM14CQ9P0S9 112 aa5.49□□□□□ -1.53
CD44-211ENST00000442151 IGLV2-18A0A075B6J9 118 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 TRAV12-2A0A075B6T6 113 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 TRAV6A0A075B6T7 132 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 C17orf112F2Z3M2 114 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 RGS13O14921 159 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 MRPS12O15235 138 aaKnown RBP5.48□□□□□ -1.53
CD44-211ENST00000442151 CCNKO75909 580 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 CST7O76096 145 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 NMBP08949 121 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 S100A10P60903 97 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 SLAQ13239 276 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 VWC2Q2TAL6 325 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 Q6ZR54 194 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 BAP18Q8IXM2 172 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 GNPNAT1Q96EK6 184 aaPredicted RBP5.48□□□□□ -1.53
CD44-211ENST00000442151 C17orf77Q96MU5 243 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 LYRM2Q9NU23 88 aaPredicted RBP5.48□□□□□ -1.53
CD44-211ENST00000442151 SLC39A9Q9NUM3 307 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 FAM24AA6NFZ4 105 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 E5RGE8 158 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 PLA2G10O15496 165 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 IGLC2P0DOY2 106 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 M6PRP20645 277 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 FGF7P21781 194 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 BTCP35070 178 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 CSN1S1P47710 185 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 ARL16Q0P5N6 197 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 OPCMLQ14982 345 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 TMEM252Q8N6L7 170 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 TMEM37Q8WXS4 190 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 SAT2Q96F10 170 aaPredicted RBP5.48□□□□□ -1.53
CD44-211ENST00000442151 SDHCQ99643 169 aaPredicted RBP5.48□□□□□ -1.53
CD44-211ENST00000442151 NOP10Q9NPE3 64 aaKnown RBP5.48□□□□□ -1.53
CD44-211ENST00000442151 NUDT15Q9NV35 164 aa5.48□□□□□ -1.53
CD44-211ENST00000442151 KMT2AQ03164 3969 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 NPIPB6E9PJ23 425 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms