RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 OXA1LQ15070 435 aa16.97■□□□□ 0.31
VARS-217ENST00000440048 Q5BKY6 102 aa16.97■□□□□ 0.31
VARS-217ENST00000440048 OR10J6PQ8NGY7 276 aa16.97■□□□□ 0.31
VARS-217ENST00000440048 TMEM208Q9BTX3 173 aa16.97■□□□□ 0.31
VARS-217ENST00000440048 FUT9Q9Y231 359 aa16.97■□□□□ 0.31
VARS-217ENST00000440048 TIMM9Q9Y5J7 89 aa16.97■□□□□ 0.31
VARS-217ENST00000440048 TRAV12-2A0A075B6T6 113 aa16.96■□□□□ 0.31
VARS-217ENST00000440048 TMEM189A5PLL7 270 aa16.96■□□□□ 0.31
VARS-217ENST00000440048 EMP1P54849 157 aa16.96■□□□□ 0.31
VARS-217ENST00000440048 Q6ZTC4 211 aa16.96■□□□□ 0.31
VARS-217ENST00000440048 BLNKQ8WV28 456 aa16.96■□□□□ 0.31
VARS-217ENST00000440048 ASB13Q8WXK3 278 aa16.96■□□□□ 0.31
VARS-217ENST00000440048 PDE6HQ13956 83 aa16.95■□□□□ 0.3
VARS-217ENST00000440048 RRN3P1Q2M238 152 aa16.95■□□□□ 0.3
VARS-217ENST00000440048 C12orf74Q32Q52 190 aa16.95■□□□□ 0.3
VARS-217ENST00000440048 ZNF767PQ75MW2 155 aa16.95■□□□□ 0.3
VARS-217ENST00000440048 OR51M1Q9H341 326 aa16.95■□□□□ 0.3
VARS-217ENST00000440048 LOC102723971A0A1B0GUV8 181 aa16.94■□□□□ 0.3
VARS-217ENST00000440048 C11orf94C9JXX5 98 aa16.94■□□□□ 0.3
VARS-217ENST00000440048 M0R3E3 92 aa16.94■□□□□ 0.3
VARS-217ENST00000440048 C2CD4CQ8TF44 421 aa16.94■□□□□ 0.3
VARS-217ENST00000440048 LINC00476Q8WZB0 136 aa16.94■□□□□ 0.3
VARS-217ENST00000440048 MRPL53Q96EL3 112 aaKnown RBP16.94■□□□□ 0.3
VARS-217ENST00000440048 AQP10Q96PS8 301 aa16.94■□□□□ 0.3
VARS-217ENST00000440048 PAXXQ9BUH6 204 aa16.94■□□□□ 0.3
VARS-217ENST00000440048 NBEAP1P0C6P0 100 aa16.93■□□□□ 0.3
VARS-217ENST00000440048 CDKN1BP46527 198 aa16.93■□□□□ 0.3
VARS-217ENST00000440048 RPP25LQ8N5L8 163 aaKnown RBP16.93■□□□□ 0.3
VARS-217ENST00000440048 FXYD5Q96DB9 178 aa16.93■□□□□ 0.3
VARS-217ENST00000440048 PRELID1Q9Y255 219 aa16.93■□□□□ 0.3
VARS-217ENST00000440048 HYDINQ4G0P3 5121 aa16.92■□□□□ 0.3
VARS-217ENST00000440048 TRAV10A0A0B4J240 114 aa16.92■□□□□ 0.3
VARS-217ENST00000440048 PRM2P04554 102 aa16.92■□□□□ 0.3
VARS-217ENST00000440048 OR10J4P0C629 311 aa16.92■□□□□ 0.3
VARS-217ENST00000440048 SPART-AS1P0CW21 52 aa16.92■□□□□ 0.3
VARS-217ENST00000440048 EXOC3-AS1Q8N2X6 119 aa16.92■□□□□ 0.3
VARS-217ENST00000440048 ZNF705GA8MUZ8 300 aaPredicted RBP16.91■□□□□ 0.3
VARS-217ENST00000440048 NPIPB6E9PJ23 425 aa16.91■□□□□ 0.3
VARS-217ENST00000440048 RNF141Q8WVD5 230 aa16.91■□□□□ 0.3
VARS-217ENST00000440048 ZNF503Q96F45 646 aa16.91■□□□□ 0.3
VARS-217ENST00000440048 AAMDCQ9H7C9 122 aa16.91■□□□□ 0.3
VARS-217ENST00000440048 DKK2Q9UBU2 259 aa16.91■□□□□ 0.3
VARS-217ENST00000440048 OR7C2O60412 319 aa16.9■□□□□ 0.3
VARS-217ENST00000440048 CT45A10P0DMU9 189 aa16.9■□□□□ 0.3
VARS-217ENST00000440048 ICAM4Q14773 271 aa16.9■□□□□ 0.3
VARS-217ENST00000440048 KIR3DS1Q14943 382 aa16.9■□□□□ 0.3
VARS-217ENST00000440048 FAM222AQ5U5X8 452 aa16.9■□□□□ 0.3
VARS-217ENST00000440048 YTHDF2Q9Y5A9 579 aaKnown RBP16.9■□□□□ 0.3
VARS-217ENST00000440048 LY6G6CO95867 125 aa16.89■□□□□ 0.29
VARS-217ENST00000440048 TSPOP30536 169 aa16.89■□□□□ 0.29
VARS-217ENST00000440048 ZNF266Q14584 549 aa16.89■□□□□ 0.29
VARS-217ENST00000440048 ACOT6Q3I5F7 207 aaPredicted RBP16.89■□□□□ 0.29
VARS-217ENST00000440048 TMEM256Q8N2U0 113 aa16.89■□□□□ 0.29
VARS-217ENST00000440048 OR2T35Q8NGX2 323 aa16.89■□□□□ 0.29
VARS-217ENST00000440048 LINC01587Q99440 93 aa16.89■□□□□ 0.29
VARS-217ENST00000440048 IGLL5B9A064 214 aa16.88■□□□□ 0.29
VARS-217ENST00000440048 M6PRP20645 277 aa16.88■□□□□ 0.29
VARS-217ENST00000440048 KHDC3LQ587J8 217 aa16.88■□□□□ 0.29
VARS-217ENST00000440048 PHYHIPLQ96FC7 376 aa16.88■□□□□ 0.29
VARS-217ENST00000440048 ODF3Q96PU9 254 aa16.88■□□□□ 0.29
VARS-217ENST00000440048 FXYD6-FXYD2A0A087WZ82 144 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 DEFB131BA0A096LNP1 70 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 TEX48A0A1B0GUV7 120 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 EIF3GO75821 320 aaKnown RBP eCLIP16.87■□□□□ 0.29
VARS-217ENST00000440048 AZU1P20160 251 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 TAS2R45P59539 299 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 ERCC8Q13216 396 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 FAM122CQ6P4D5 195 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 HSD17B11Q8NBQ5 300 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 INO80EQ8NBZ0 244 aaPredicted RBP16.87■□□□□ 0.29
VARS-217ENST00000440048 PLA2G2EQ9NZK7 142 aa16.87■□□□□ 0.29
VARS-217ENST00000440048 RNF222A6NCQ9 220 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 LEPP41159 167 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 TAS2R60P59551 318 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 RAB2AP61019 212 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 UBE2L3P68036 154 aaKnown RBP16.86■□□□□ 0.29
VARS-217ENST00000440048 GFI1BQ5VTD9 330 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 C20orf144Q9BQM9 153 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 NIPSNAP3BQ9BS92 247 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 TNFSF18Q9UNG2 199 aa16.86■□□□□ 0.29
VARS-217ENST00000440048 G3V3Q6 166 aa16.85■□□□□ 0.29
VARS-217ENST00000440048 J3KRW8 73 aa16.85■□□□□ 0.29
VARS-217ENST00000440048 TCTAP57738 103 aa16.85■□□□□ 0.29
VARS-217ENST00000440048 AGPAT4-IT1Q9H0P7 198 aa16.85■□□□□ 0.29
VARS-217ENST00000440048 APLNQ9ULZ1 77 aa16.85■□□□□ 0.29
VARS-217ENST00000440048 A0A1W2PPV4 95 aa16.84■□□□□ 0.29
VARS-217ENST00000440048 ATP6V0CP27449 155 aa16.84■□□□□ 0.29
VARS-217ENST00000440048 RANP62826 216 aaKnown RBP16.84■□□□□ 0.29
VARS-217ENST00000440048 OR10G4Q8NGN3 311 aa16.84■□□□□ 0.29
VARS-217ENST00000440048 OR10G9Q8NGN4 311 aa16.84■□□□□ 0.29
VARS-217ENST00000440048 OR10G7Q8NGN6 311 aa16.84■□□□□ 0.29
VARS-217ENST00000440048 OR2G3Q8NGZ4 309 aa16.84■□□□□ 0.29
VARS-217ENST00000440048 LINC00477Q96M19 166 aa16.84■□□□□ 0.29
VARS-217ENST00000440048 PSMG3Q9BT73 122 aaPredicted RBP16.84■□□□□ 0.29
VARS-217ENST00000440048 IGKV2-40A0A087WW87 121 aaPredicted RBP16.83■□□□□ 0.28
VARS-217ENST00000440048 PLAC8L1A1L4L8 177 aa16.83■□□□□ 0.28
VARS-217ENST00000440048 H7BYZ3 331 aa16.83■□□□□ 0.28
VARS-217ENST00000440048 IGKV2D-40P01614 121 aaPredicted RBP16.83■□□□□ 0.28
VARS-217ENST00000440048 HTN1P15515 57 aa16.83■□□□□ 0.28
VARS-217ENST00000440048 C9orf47Q6ZRZ4 202 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms