RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CCDC28AQ8IWP9 274 aa13.01□□□□□ -0.33
AC004540.1-201ENST00000439120 TMEM263Q8WUH6 116 aaKnown RBP13.01□□□□□ -0.33
AC004540.1-201ENST00000439120 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
AC004540.1-201ENST00000439120 H3BQ15 152 aa13□□□□□ -0.33
AC004540.1-201ENST00000439120 FAM3BP58499 235 aaPredicted RBP13□□□□□ -0.33
AC004540.1-201ENST00000439120 NOP10Q9NPE3 64 aaKnown RBP13□□□□□ -0.33
AC004540.1-201ENST00000439120 TRAV5A0A0B4J249 113 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 PRAC2D3DTV9 90 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 FGF7P21781 194 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 RPL29P47914 159 aaKnown RBP12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 RAB32Q13637 225 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 VWC2Q2TAL6 325 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 Q6ZR54 194 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 TMEM252Q8N6L7 170 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 PARD6GQ9BYG4 376 aaPredicted RBP12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 C11orf1Q9H5F2 150 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 GPN1Q9HCN4 374 aaPredicted RBP12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 SLC39A9Q9NUM3 307 aa12.99□□□□□ -0.33
AC004540.1-201ENST00000439120 A0A1B0GVY2 172 aa12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 IGSF23A1L1A6 192 aa12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 J3KRW8 73 aa12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 LEPP41159 167 aa12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 ATP6V1FQ16864 119 aa12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 C1orf134Q5TEV5 83 aa12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 GFI1BQ5VTD9 330 aa12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 RNASE8Q8TDE3 154 aaKnown RBP12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 SAT2Q96F10 170 aaPredicted RBP12.98□□□□□ -0.33
AC004540.1-201ENST00000439120 NACAE9PAV3 2078 aa12.97□□□□□ -0.33
AC004540.1-201ENST00000439120 SNURFLB1AK76 121 aa12.97□□□□□ -0.33
AC004540.1-201ENST00000439120 KIR3DS1Q14943 382 aa12.97□□□□□ -0.33
AC004540.1-201ENST00000439120 S100ZQ8WXG8 99 aa12.97□□□□□ -0.33
AC004540.1-201ENST00000439120 ZNF253O75346 499 aa12.96□□□□□ -0.33
AC004540.1-201ENST00000439120 CCL18P55774 89 aa12.96□□□□□ -0.33
AC004540.1-201ENST00000439120 CLINT1Q14677 625 aa12.96□□□□□ -0.33
AC004540.1-201ENST00000439120 ENKURQ8TC29 256 aa12.96□□□□□ -0.33
AC004540.1-201ENST00000439120 ODF3Q96PU9 254 aa12.96□□□□□ -0.33
AC004540.1-201ENST00000439120 ZNF586Q9NXT0 402 aa12.96□□□□□ -0.33
AC004540.1-201ENST00000439120 TIMM9Q9Y5J7 89 aa12.96□□□□□ -0.33
AC004540.1-201ENST00000439120 TRAV12-3A0A0B4J271 114 aa12.95□□□□□ -0.34
AC004540.1-201ENST00000439120 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
AC004540.1-201ENST00000439120 MPDU1O75352 247 aa12.95□□□□□ -0.34
AC004540.1-201ENST00000439120 RLN2P04090 185 aa12.95□□□□□ -0.34
AC004540.1-201ENST00000439120 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
AC004540.1-201ENST00000439120 LINC00299Q6ZSB3 139 aa12.95□□□□□ -0.34
AC004540.1-201ENST00000439120 TRBV19A0A075B6N1 114 aa12.94□□□□□ -0.34
AC004540.1-201ENST00000439120 IL15RAQ13261 267 aa12.94□□□□□ -0.34
AC004540.1-201ENST00000439120 ASAH1Q13510 395 aa12.94□□□□□ -0.34
AC004540.1-201ENST00000439120 OR5I1Q13606 314 aa12.94□□□□□ -0.34
AC004540.1-201ENST00000439120 CHAC2Q8WUX2 184 aa12.94□□□□□ -0.34
AC004540.1-201ENST00000439120 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
AC004540.1-201ENST00000439120 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
AC004540.1-201ENST00000439120 HIST1H1EP10412 219 aaKnown RBP12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 BLNKQ8WV28 456 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 RNF141Q8WVD5 230 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 PYGO2Q9BRQ0 406 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 NPCDR1Q9BY65 106 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 SLC25A31Q9H0C2 315 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 AAMDCQ9H7C9 122 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 DNAH2Q9P225 4427 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 FAT2Q9NYQ8 4349 aa12.93□□□□□ -0.34
AC004540.1-201ENST00000439120 GAGE12BA1L429 117 aa12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 GAGE7O76087 117 aa12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 PDE6HQ13956 83 aa12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 GNPNAT1Q96EK6 184 aaPredicted RBP12.92□□□□□ -0.34
AC004540.1-201ENST00000439120 HERC2O95714 4834 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 E5RGE8 158 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 M0R3E3 92 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 SLC25A5P05141 298 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 PYYP10082 97 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 M6PRP20645 277 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 NHLH2Q02577 135 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 LRRC37A5PQ49AS3 106 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 OR5C1Q8NGR4 320 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 ZNRF2Q8NHG8 242 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 THAP6Q8TBB0 222 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 KCNIP2Q9NS61 270 aa12.91□□□□□ -0.34
AC004540.1-201ENST00000439120 TRAV26-1A0A087WT03 109 aa12.9□□□□□ -0.34
AC004540.1-201ENST00000439120 NBDYA0A0U1RRE5 68 aa12.9□□□□□ -0.34
AC004540.1-201ENST00000439120 SIX6O95475 246 aa12.9□□□□□ -0.34
AC004540.1-201ENST00000439120 ERCC8Q13216 396 aa12.9□□□□□ -0.34
AC004540.1-201ENST00000439120 LINC00477Q96M19 166 aa12.9□□□□□ -0.34
AC004540.1-201ENST00000439120 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
AC004540.1-201ENST00000439120 A0A0J9YY99 117 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 C7orf71A4D174 169 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 NDUFB4O95168 129 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 CYCSP99999 105 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 GCSAMLQ5JQS6 135 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 SSX7Q7RTT5 188 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 EXOC3-AS1Q8N2X6 119 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 LINC00612Q8N6U2 182 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 ZNF680Q8NEM1 530 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 NMES1Q9C002 83 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 LINC00588Q9Y4M8 146 aa12.89□□□□□ -0.35
AC004540.1-201ENST00000439120 DNAH17Q9UFH2 4485 aa12.88□□□□□ -0.35
AC004540.1-201ENST00000439120 PRAF2O60831 178 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms