RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
TSC2-206ENST00000439117 CYYR1Q96J86 154 aa12.15□□□□□ -0.46
TSC2-206ENST00000439117 IL15RAQ13261 267 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 UTF1Q5T230 341 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 WNK2Q9Y3S1 2297 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 RNASE2P10153 161 aaKnown RBP12.14□□□□□ -0.47
TSC2-206ENST00000439117 PDE6HQ13956 83 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 IGFL3Q6UXB1 125 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 RNASE8Q8TDE3 154 aaKnown RBP12.14□□□□□ -0.47
TSC2-206ENST00000439117 Q6P435 159 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 RNF5Q99942 180 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 TIMM21Q9BVV7 248 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 DOCK7Q96N67 2140 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 TMEM178BH3BS89 294 aa12.14□□□□□ -0.47
TSC2-206ENST00000439117 B5MCH6 92 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 FCN3O75636 299 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 NPC2P61916 151 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 CEND1Q8N111 149 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 OR11H6Q8NGC7 330 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 FANCMQ8IYD8 2048 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 LY6G5BQ8NDX9 201 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 PAX4O43316 350 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 TRACP01848 142 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 RPL15P61313 204 aaKnown RBP12.13□□□□□ -0.47
TSC2-206ENST00000439117 C9orf139Q6ZV77 190 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 PRSS33Q8NF86 280 aa12.13□□□□□ -0.47
TSC2-206ENST00000439117 SIGLEC15Q6ZMC9 328 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 TRGV2A0A075B6R0 118 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 VWC2LB2RUY7 222 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 LEPROTO15243 131 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 DSCR9P59020 149 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 PMVKQ15126 192 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 Q8N8P6 123 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 LINC00477Q96M19 166 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 PF4P02776 101 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 C5orf24Q7Z6I8 188 aa12.12□□□□□ -0.47
TSC2-206ENST00000439117 ADARB2-AS1A8MUL3 147 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 CFHR2P36980 270 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 C1orf147Q96MC9 270 aaPredicted RBP12.11□□□□□ -0.47
TSC2-206ENST00000439117 PRO1854Q9UHT4 67 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 HAPLN4Q86UW8 402 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 ZNF114Q8NC26 417 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 ITLN2Q8WWU7 325 aaPredicted RBP12.11□□□□□ -0.47
TSC2-206ENST00000439117 ZNF581Q9P0T4 197 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 TIMM23O14925 209 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 MALP21145 153 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 CD24P25063 80 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 COLCA1Q6ZS62 124 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 Q8TAT8 98 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 JPT2Q9H910 190 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 SLC25A16P16260 332 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 PRR30Q53SZ7 412 aaPredicted RBP12.11□□□□□ -0.47
TSC2-206ENST00000439117 BOD1L2Q8IYS8 172 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 CD177Q8N6Q3 437 aa12.11□□□□□ -0.47
TSC2-206ENST00000439117 PAX8Q06710 450 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 C14orf178Q8N769 122 aaPredicted RBP12.1□□□□□ -0.47
TSC2-206ENST00000439117 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 CREBBPQ92793 2442 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 PRSS57Q6UWY2 283 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 SOCS3O14543 225 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 TCF15Q12870 199 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 RCHY1Q96PM5 261 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 VWC2Q2TAL6 325 aa12.1□□□□□ -0.47
TSC2-206ENST00000439117 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 FGF6P10767 208 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 PLXNA2O75051 1894 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.09□□□□□ -0.478e-7■■■□□ 15.7
TSC2-206ENST00000439117 TEX48A0A1B0GUV7 120 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 TMEM200BQ69YZ2 307 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 C2orf66Q6UXQ4 117 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 Q6ZVH6 145 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 SS18L2Q9UHA2 77 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 TMEM213A2RRL7 107 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 IGHV3-11P01762 117 aa12.09□□□□□ -0.47
TSC2-206ENST00000439117 H0YJW9 148 aa12.08□□□□□ -0.47
TSC2-206ENST00000439117 TMEM141Q96I45 108 aa12.08□□□□□ -0.47
TSC2-206ENST00000439117 SHANK2-AS3Q9BTD1 123 aa12.08□□□□□ -0.47
TSC2-206ENST00000439117 METRNQ9UJH8 293 aa12.08□□□□□ -0.47
TSC2-206ENST00000439117 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
TSC2-206ENST00000439117 HLA-DMBP28068 263 aa12.08□□□□□ -0.48
TSC2-206ENST00000439117 C12orf74Q32Q52 190 aa12.08□□□□□ -0.48
TSC2-206ENST00000439117 AMTNQ6UX39 209 aa12.08□□□□□ -0.48
TSC2-206ENST00000439117 PRSS22Q9GZN4 317 aa12.08□□□□□ -0.48
TSC2-206ENST00000439117 KIAA2026Q5HYC2 2103 aa12.08□□□□□ -0.48
TSC2-206ENST00000439117 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
TSC2-206ENST00000439117 F8VRH5 84 aa12.07□□□□□ -0.48
TSC2-206ENST00000439117 PRIMA1Q86XR5 153 aa12.07□□□□□ -0.48
TSC2-206ENST00000439117 WIPF2Q8TF74 440 aaPredicted RBP12.07□□□□□ -0.48
TSC2-206ENST00000439117 CADP27708 2225 aa12.07□□□□□ -0.48
TSC2-206ENST00000439117 NUP210Q8TEM1 1887 aaPredicted RBP12.07□□□□□ -0.48
TSC2-206ENST00000439117 SMIM20Q8N5G0 67 aa12.07□□□□□ -0.48
TSC2-206ENST00000439117 C15orf53Q8NAA6 179 aa12.07□□□□□ -0.48
TSC2-206ENST00000439117 SPXQ9BT56 116 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms