RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 THYN1Q9P016 225 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 A0A1B0GW15 77 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 TMEM189A5PLL7 270 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 CTSGP08311 255 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 FAM106CPP0CH98 169 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 EGR2P11161 476 aaPredicted RBP9.21□□□□□ -0.93
CD44-209ENST00000433892 TMEM11P17152 192 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 RELQ04864 619 aaPredicted RBP9.21□□□□□ -0.93
CD44-209ENST00000433892 FAM106AQ4KMX7 169 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 Q8N6K4 173 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 GATD1Q8NB37 220 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 Q8TAT8 98 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 RAXQ9Y2V3 346 aa9.21□□□□□ -0.93
CD44-209ENST00000433892 LOC389332A0A1B0GUA5 103 aa9.21□□□□□ -0.94
CD44-209ENST00000433892 NDUFS7O75251 213 aa9.21□□□□□ -0.94
CD44-209ENST00000433892 RPL7P18124 248 aaKnown RBP9.21□□□□□ -0.94
CD44-209ENST00000433892 PSG9Q00887 426 aa9.21□□□□□ -0.94
CD44-209ENST00000433892 PET117Q6UWS5 81 aa9.21□□□□□ -0.94
CD44-209ENST00000433892 FA2HQ7L5A8 372 aa9.21□□□□□ -0.94
CD44-209ENST00000433892 SMAD5-AS1Q9Y6J3 95 aa9.21□□□□□ -0.94
CD44-209ENST00000433892 AKAP6Q13023 2319 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 IGHV7-81A0A0B4J1V7 117 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 D6R8Y8 96 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 TCF21O43680 179 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 HLA-DMBP28068 263 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 IFI27P40305 119 aaPredicted RBP9.2□□□□□ -0.94
CD44-209ENST00000433892 AMN1Q8IY45 258 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 SPTBN4Q9H254 2564 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 KLRB1Q12918 225 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 MPV17L2Q567V2 206 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 PRR25Q96S07 402 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 VGLL1Q99990 258 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 RABAC1Q9UI14 185 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 MSRB2Q9Y3D2 182 aa9.2□□□□□ -0.94
CD44-209ENST00000433892 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 LOXL1Q08397 574 aaPredicted RBP9.19□□□□□ -0.94
CD44-209ENST00000433892 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 C1orf122Q6ZSJ8 110 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 ORAOV1Q8WV07 137 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 ZNF747Q9BV97 191 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 COX11Q9Y6N1 276 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 MAP1AP78559 2803 aaPredicted RBP9.19□□□□□ -0.94
CD44-209ENST00000433892 A0A1W2PPR1 153 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 NCR2O95944 276 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 IGHG4P01861 327 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
CD44-209ENST00000433892 EBI3Q14213 229 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 SAPCD1Q5SSQ6 148 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 OR10AG1Q8NH19 301 aa9.19□□□□□ -0.94
CD44-209ENST00000433892 COL12A1Q99715 3063 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 OOSP1A8MZH6 123 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 GPR183P32249 361 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 MINOS1Q5TGZ0 78 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 Q8N9W7 124 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 PRELID3AQ96N28 172 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 SCRT2Q9NQ03 307 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 SIGLEC8Q9NYZ4 499 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 MINOS1-NBL1R4GNA1 71 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 NCOR2Q9Y618 2525 aa9.18□□□□□ -0.94
CD44-209ENST00000433892 A0A096LNJ9 63 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 CCL25O15444 150 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 NUDT3O95989 172 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 FXYD7P58549 80 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 ECSCRQ19T08 205 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 C15orf32Q32M92 178 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 ZNF738Q8NE65 137 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 ITPR1Q14643 2758 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 PTTG1IPP53801 180 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 TWIST1Q15672 202 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
CD44-209ENST00000433892 COX8CQ7Z4L0 72 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 SIRPDQ9H106 197 aa9.17□□□□□ -0.94
CD44-209ENST00000433892 HIVEP3Q5T1R4 2406 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 SCGB2A1O75556 95 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 DTX2Q86UW9 622 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 FER1L6-AS1Q8NA97 138 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 OR8A1Q8NGG7 326 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 U3KQK5 164 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 IGHV3-66A0A0C4DH42 116 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 CLEC3BP05452 202 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 ERCC8Q13216 396 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 ZNF575Q86XF7 245 aa9.16□□□□□ -0.94
CD44-209ENST00000433892 PRAC2D3DTV9 90 aa9.15□□□□□ -0.94
CD44-209ENST00000433892 ORM1P02763 201 aa9.15□□□□□ -0.94
CD44-209ENST00000433892 BMI1P35226 326 aa9.15□□□□□ -0.94
CD44-209ENST00000433892 RHOGP84095 191 aa9.15□□□□□ -0.94
CD44-209ENST00000433892 ERASQ7Z444 233 aa9.15□□□□□ -0.94
CD44-209ENST00000433892 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
CD44-209ENST00000433892 MS4A6AQ9H2W1 248 aa9.15□□□□□ -0.94
CD44-209ENST00000433892 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 A0A087X0K7 114 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 ATP6V0E1O15342 81 aa9.15□□□□□ -0.95
CD44-209ENST00000433892 SNAI2O43623 268 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms