RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 ATP6V1FQ16864 119 aa8.85□□□□□ -0.99
SMPD4-204ENST00000430682 STX12Q86Y82 276 aa8.85□□□□□ -0.99
SMPD4-204ENST00000430682 OR5C1Q8NGR4 320 aa8.85□□□□□ -0.99
SMPD4-204ENST00000430682 THAP6Q8TBB0 222 aa8.85□□□□□ -0.99
SMPD4-204ENST00000430682 SLC50A1Q9BRV3 221 aa8.85□□□□□ -0.99
SMPD4-204ENST00000430682 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
SMPD4-204ENST00000430682 M0R3E3 92 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 PRAF2O60831 178 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 CT45A10P0DMU9 189 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 HBG1P69891 147 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 HBG2P69892 147 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 CLINT1Q14677 625 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 S100A7AQ86SG5 101 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 OR1L4Q8NGR5 311 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 FAM167A-AS1Q96KT0 104 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 LINC01587Q99440 93 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 NDUFAF3Q9BU61 184 aa8.84□□□□□ -0.99
SMPD4-204ENST00000430682 TRBV19A0A075B6N1 114 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 E5RGE8 158 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 TSPOP30536 169 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 GFI1BQ5VTD9 330 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 MIR17HGQ75NE6 70 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 PPP1R1CQ8WVI7 109 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 PFDN5Q99471 154 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 SLC25A2Q9BXI2 301 aa8.83□□□□□ -1
SMPD4-204ENST00000430682 NPIPB6E9PJ23 425 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 J3KRW8 73 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 CDKN1BP46527 198 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 DAD1P61803 113 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 ERCC8Q13216 396 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 TMEM88Q6PEY1 159 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 POM121L12Q8N7R1 296 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 WDR61Q9GZS3 305 aaKnown RBP8.82□□□□□ -1
SMPD4-204ENST00000430682 PPP1R14DQ9NXH3 145 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 TMEM14CQ9P0S9 112 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 RNF24Q9Y225 148 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 MUC4Q99102 2169 aa8.82□□□□□ -1
SMPD4-204ENST00000430682 MPDU1O75352 247 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 EIF3GO75821 320 aaKnown RBP eCLIP8.81□□□□□ -1
SMPD4-204ENST00000430682 MPC2O95563 127 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 RLN2P04090 185 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 DEFB130BP0DP73 79 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 DEFB130AP0DP74 79 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 HIST1H1EP10412 219 aaKnown RBP8.81□□□□□ -1
SMPD4-204ENST00000430682 HTN1P15515 57 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 GUK1Q16774 197 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 EXOC3-AS1Q8N2X6 119 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
SMPD4-204ENST00000430682 SLC25A31Q9H0C2 315 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 WFDC1Q9HC57 220 aa8.81□□□□□ -1
SMPD4-204ENST00000430682 TEX48A0A1B0GUV7 120 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 LYRM9A8MSI8 78 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 M0R2N4 97 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 SSNA1O43805 119 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 ZNF253O75346 499 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 P0DMU3 169 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 FAM231AP0DMU4 169 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 FAM231CP0DMU5 169 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 TAS2R60P59551 318 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 Q6ZQT7 251 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 OR10J6PQ8NGY7 276 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 BLNKQ8WV28 456 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 ZNF503Q96F45 646 aa8.8□□□□□ -1
SMPD4-204ENST00000430682 TRAV12-3A0A0B4J271 114 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 CYCSP99999 105 aaKnown RBP8.79□□□□□ -1
SMPD4-204ENST00000430682 FXYD5Q96DB9 178 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 FAM210BQ96KR6 192 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 FAM19A4Q96LR4 140 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 SMIM3Q9BZL3 60 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 NOP10Q9NPE3 64 aaKnown RBP8.79□□□□□ -1
SMPD4-204ENST00000430682 MBD2Q9UBB5 411 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 HSPB11Q9Y547 144 aa8.79□□□□□ -1
SMPD4-204ENST00000430682 IGKV2-40A0A087WW87 121 aaPredicted RBP8.78□□□□□ -1
SMPD4-204ENST00000430682 H7BYZ3 331 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 IGKV2D-40P01614 121 aaPredicted RBP8.78□□□□□ -1
SMPD4-204ENST00000430682 OR10J4P0C629 311 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 DEFA1P59665 94 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 DEFA3P59666 94 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 CD300CQ08708 224 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 ICAM4Q14773 271 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 PRR9Q5T870 116 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 PHYHIPLQ96FC7 376 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 C16orf74Q96GX8 76 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 ODF3Q96PU9 254 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 VGLL1Q99990 258 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 BATF3Q9NR55 127 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 TIMM9Q9Y5J7 89 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 ALG5Q9Y673 324 aa8.78□□□□□ -1
SMPD4-204ENST00000430682 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
SMPD4-204ENST00000430682 RTL8CO15255 209 aa8.77□□□□□ -1.01
SMPD4-204ENST00000430682 NBEAP1P0C6P0 100 aa8.77□□□□□ -1.01
SMPD4-204ENST00000430682 RPL12P30050 165 aaKnown RBP8.77□□□□□ -1.01
SMPD4-204ENST00000430682 BTN1A1Q13410 526 aa8.77□□□□□ -1.01
SMPD4-204ENST00000430682 PDE6HQ13956 83 aa8.77□□□□□ -1.01
SMPD4-204ENST00000430682 FAM122CQ6P4D5 195 aa8.77□□□□□ -1.01
SMPD4-204ENST00000430682 LINC00612Q8N6U2 182 aa8.77□□□□□ -1.01
SMPD4-204ENST00000430682 TMEM263Q8WUH6 116 aaKnown RBP8.77□□□□□ -1.01
SMPD4-204ENST00000430682 MRPL53Q96EL3 112 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms