RNA–Protein interactions for RNA: ENST00000428193.6

RPL28-203, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-203ENST00000428193 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
RPL28-203ENST00000428193 WDR61Q9GZS3 305 aaKnown RBP10.95□□□□□ -0.66
RPL28-203ENST00000428193 MBD2Q9UBB5 411 aa10.95□□□□□ -0.66
RPL28-203ENST00000428193 DKK2Q9UBU2 259 aa10.95□□□□□ -0.66
RPL28-203ENST00000428193 APLNQ9ULZ1 77 aa10.95□□□□□ -0.66
RPL28-203ENST00000428193 HSPB11Q9Y547 144 aa10.95□□□□□ -0.66
RPL28-203ENST00000428193 J3KRW8 73 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 HTN1P15515 57 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 TCTAP57738 103 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 GUK1Q16774 197 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 MIR17HGQ75NE6 70 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
RPL28-203ENST00000428193 LINC01587Q99440 93 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 ATP5SQ99766 215 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 NIPSNAP3BQ9BS92 247 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 TIMM9Q9Y5J7 89 aa10.94□□□□□ -0.66
RPL28-203ENST00000428193 C17orf112F2Z3M2 114 aa10.93□□□□□ -0.66
RPL28-203ENST00000428193 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
RPL28-203ENST00000428193 KCNIP2Q9NS61 270 aa10.93□□□□□ -0.66
RPL28-203ENST00000428193 TRBV19A0A075B6N1 114 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 TEX48A0A1B0GUV7 120 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 M0R3E3 92 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 PTTG1O95997 202 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 IFNA5P01569 189 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 HIST1H1EP10412 219 aaKnown RBP10.92□□□□□ -0.66
RPL28-203ENST00000428193 CDKN1BP46527 198 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 SCGB1C1Q8TD33 95 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 SLC25A2Q9BXI2 301 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 TMEM14CQ9P0S9 112 aa10.92□□□□□ -0.66
RPL28-203ENST00000428193 AZU1P20160 251 aa10.91□□□□□ -0.66
RPL28-203ENST00000428193 DAD1P61803 113 aa10.91□□□□□ -0.66
RPL28-203ENST00000428193 KIR3DS1Q14943 382 aa10.91□□□□□ -0.66
RPL28-203ENST00000428193 FFAR4Q5NUL3 377 aa10.91□□□□□ -0.66
RPL28-203ENST00000428193 EXOC3-AS1Q8N2X6 119 aa10.91□□□□□ -0.66
RPL28-203ENST00000428193 ZNF253O75346 499 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 NDUFB4O95168 129 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 TSPOP30536 169 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 FCN2Q15485 313 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 TMEM256Q8N2U0 113 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
RPL28-203ENST00000428193 MED28Q9H204 178 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 OR51M1Q9H341 326 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 AAMDCQ9H7C9 122 aa10.9□□□□□ -0.66
RPL28-203ENST00000428193 VPS13DQ5THJ4 4388 aa10.9□□□□□ -0.67
RPL28-203ENST00000428193 OR7C2O60412 319 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 OR10J4P0C629 311 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 CT45A10P0DMU9 189 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 ERCC8Q13216 396 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 ICAM4Q14773 271 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 GFI1BQ5VTD9 330 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 FAM167A-AS1Q96KT0 104 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 PAXXQ9BUH6 204 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 FUT9Q9Y231 359 aa10.89□□□□□ -0.67
RPL28-203ENST00000428193 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 EIF3GO75821 320 aaKnown RBP eCLIP10.88□□□□□ -0.675e-18■□□□□ 10.2
RPL28-203ENST00000428193 NBEAP1P0C6P0 100 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 DEFB130BP0DP73 79 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 DEFB130AP0DP74 79 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 LEPP41159 167 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 TAS2R60P59551 318 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 MRPL53Q96EL3 112 aaKnown RBP10.88□□□□□ -0.67
RPL28-203ENST00000428193 WFDC1Q9HC57 220 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 PRELID1Q9Y255 219 aa10.88□□□□□ -0.67
RPL28-203ENST00000428193 EPPK1P58107 5090 aaKnown RBP10.88□□□□□ -0.67
RPL28-203ENST00000428193 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
RPL28-203ENST00000428193 H7BYZ3 331 aa10.87□□□□□ -0.67
RPL28-203ENST00000428193 PDE6HQ13956 83 aa10.87□□□□□ -0.67
RPL28-203ENST00000428193 RNF141Q8WVD5 230 aa10.87□□□□□ -0.67
RPL28-203ENST00000428193 C16orf74Q96GX8 76 aa10.87□□□□□ -0.67
RPL28-203ENST00000428193 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
RPL28-203ENST00000428193 IGKV2-40A0A087WW87 121 aaPredicted RBP10.86□□□□□ -0.67
RPL28-203ENST00000428193 LYRM9A8MSI8 78 aa10.86□□□□□ -0.67
RPL28-203ENST00000428193 IGKV2D-40P01614 121 aaPredicted RBP10.86□□□□□ -0.67
RPL28-203ENST00000428193 UBE2L3P68036 154 aaKnown RBP10.86□□□□□ -0.67
RPL28-203ENST00000428193 OXA1LQ15070 435 aa10.86□□□□□ -0.67
RPL28-203ENST00000428193 FXYD5Q96DB9 178 aa10.86□□□□□ -0.67
RPL28-203ENST00000428193 PHYHIPLQ96FC7 376 aa10.86□□□□□ -0.67
RPL28-203ENST00000428193 PLAC8L1A1L4L8 177 aa10.85□□□□□ -0.67
RPL28-203ENST00000428193 CCDC28AQ8IWP9 274 aa10.85□□□□□ -0.67
RPL28-203ENST00000428193 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
RPL28-203ENST00000428193 C20orf144Q9BQM9 153 aa10.85□□□□□ -0.67
RPL28-203ENST00000428193 NOP10Q9NPE3 64 aaKnown RBP10.85□□□□□ -0.67
RPL28-203ENST00000428193 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
RPL28-203ENST00000428193 KHDC3LQ587J8 217 aa10.84□□□□□ -0.67
RPL28-203ENST00000428193 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
RPL28-203ENST00000428193 TMEM88Q6PEY1 159 aa10.84□□□□□ -0.67
RPL28-203ENST00000428193 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
RPL28-203ENST00000428193 TMEM263Q8WUH6 116 aaKnown RBP10.84□□□□□ -0.67
RPL28-203ENST00000428193 ZNF503Q96F45 646 aa10.84□□□□□ -0.67
RPL28-203ENST00000428193 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
RPL28-203ENST00000428193 A0A1W2PPV4 95 aa10.83□□□□□ -0.68
RPL28-203ENST00000428193 F5H768 121 aa10.83□□□□□ -0.68
RPL28-203ENST00000428193 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
RPL28-203ENST00000428193 P0DMU3 169 aa10.83□□□□□ -0.68
RPL28-203ENST00000428193 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
RPL28-203ENST00000428193 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
RPL28-203ENST00000428193 TAS2R45P59539 299 aa10.83□□□□□ -0.68
RPL28-203ENST00000428193 RAB2AP61019 212 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms