RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZNRF2Q8NHG8 242 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 ZNF837Q96EG3 531 aaPredicted RBP4.64□□□□□ -1.67
HERC4-206ENST00000427635 NDUFA12Q9UI09 145 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 THADAQ6YHU6 1953 aa4.64□□□□□ -1.67
HERC4-206ENST00000427635 DOCK5Q9H7D0 1870 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 XIRP1Q702N8 1843 aaKnown RBP4.63□□□□□ -1.67
HERC4-206ENST00000427635 IGLL5B9A064 214 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 CLPSL2Q6UWE3 100 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 FAM231DQ6ZW35 169 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 C14orf178Q8N769 122 aaPredicted RBP4.63□□□□□ -1.67
HERC4-206ENST00000427635 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 LIME1Q9H400 295 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 CLPSL1A2RUU4 121 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 SOCS3O14543 225 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 C9orf153Q5TBE3 101 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 H3BUA1 57 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 MPZP25189 248 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 IFI27L1Q96BM0 104 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 SCN8AQ9UQD0 1980 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 IGFL3Q6UXB1 125 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 CD177Q8N6Q3 437 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 EXOC3-AS1Q8N2X6 119 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 C16orf74Q96GX8 76 aa4.63□□□□□ -1.67
HERC4-206ENST00000427635 RNASE7Q9H1E1 156 aaKnown RBP4.63□□□□□ -1.67
HERC4-206ENST00000427635 GUSBP1Q15486 140 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 GGNQ86UU5 652 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 TMEM170AQ8WVE7 144 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 TUBGCP6Q96RT7 1819 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 AHCTF1Q8WYP5 2266 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 ATP5G1P05496 136 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 UBE2D1P51668 147 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 DEFB112Q30KQ8 113 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 TMEM141Q96I45 108 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 C18orf12Q96KH6 178 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 B9D2Q9BPU9 175 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 NOP10Q9NPE3 64 aaKnown RBP4.62□□□□□ -1.67
HERC4-206ENST00000427635 OSTCQ9NRP0 149 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 COL11A2P13942 1736 aaPredicted RBP4.62□□□□□ -1.67
HERC4-206ENST00000427635 IGKV1D-43A0A0B4J1Z2 117 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 SHISA3A0PJX4 238 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 H3BS24 57 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 ADMP35318 185 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 GAGE2AQ6NT46 116 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 C2orf82Q6UX34 121 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 Q6ZQT7 251 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 ZC2HC1AQ96GY0 325 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 COL24A1Q17RW2 1714 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 COL11A1P12107 1806 aaPredicted RBP4.62□□□□□ -1.67
HERC4-206ENST00000427635 LRRC37AA6NMS7 1700 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 IGKV1-39P01597 117 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 IGKV1D-39P04432 117 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 LYZL1Q6UWQ5 148 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 TRBV5-3A0A0A0MS03 114 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 FAM240AA0A1B0GVK7 77 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 A8MWP6 167 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 NXPH4O95158 308 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 IGHV3-30P01768 117 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 IGHV3-33P01772 117 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 IGHV3-30-3P0DP02 117 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 IGHV3-30-5P0DP03 117 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 EFNB3Q15768 340 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 SFTA2Q6UW10 78 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 KIR2DL5BQ8NHK3 375 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 ANKRD36A6QL64 1941 aa4.62□□□□□ -1.67
HERC4-206ENST00000427635 C5orf24Q7Z6I8 188 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 C8orf49Q96NF6 230 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 RBM38Q9H0Z9 239 aaKnown RBP4.61□□□□□ -1.67
HERC4-206ENST00000427635 TRAV8-3A0A0A6YYJ7 113 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 C5orf63A6NC05 138 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 GZMMP51124 257 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 FOXE3Q13461 319 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 C9orf47Q6ZRZ4 202 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 CCDC88CQ9P219 2028 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 A0A1B0GW64 132 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 A8MXK9 166 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 IGFBP3P17936 291 aaPredicted RBP4.61□□□□□ -1.67
HERC4-206ENST00000427635 LINC01590Q5TEZ4 76 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 LYZL4Q96KX0 146 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 CAMK2N2Q96S95 79 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 KIR2DL5BA0A0G2JN68 375 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 KIR2DL5BA0A0G2JPC4 375 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 SPINK8P0C7L1 97 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 CXCL2P19875 107 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 MYCNOSP40205 109 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 HILS1P60008 231 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 NHLRC3Q5JS37 347 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 C10orf55Q5SWW7 151 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 FOXI2Q6ZQN5 318 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 KIR2DL5AQ8N109 375 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 IMMP2LQ96T52 175 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 GNB1LQ9BYB4 327 aa4.61□□□□□ -1.67
HERC4-206ENST00000427635 D6R8Y8 96 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 FGF16O43320 207 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 GYPEP15421 78 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 NEGR1Q7Z3B1 354 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 C7orf33Q8WU49 177 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 WFDC6Q9BQY6 131 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 U3KQE9 123 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 PARP14Q460N5 1801 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms