RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PRAC2D3DTV9 90 aa18.98■□□□□ 0.63
CDK9-202ENST00000421939 HBE1P02100 147 aa18.98■□□□□ 0.63
CDK9-202ENST00000421939 PDE6HQ13956 83 aa18.98■□□□□ 0.63
CDK9-202ENST00000421939 OXA1LQ15070 435 aa18.98■□□□□ 0.63
CDK9-202ENST00000421939 OR10J6PQ8NGY7 276 aa18.98■□□□□ 0.63
CDK9-202ENST00000421939 FUT9Q9Y231 359 aa18.98■□□□□ 0.63
CDK9-202ENST00000421939 TIMM9Q9Y5J7 89 aa18.97■□□□□ 0.63
CDK9-202ENST00000421939 TRAV12-2A0A075B6T6 113 aa18.96■□□□□ 0.63
CDK9-202ENST00000421939 NDUFB4O95168 129 aa18.96■□□□□ 0.63
CDK9-202ENST00000421939 Q6ZTC4 211 aa18.96■□□□□ 0.63
CDK9-202ENST00000421939 BLNKQ8WV28 456 aa18.96■□□□□ 0.63
CDK9-202ENST00000421939 MRPL53Q96EL3 112 aaKnown RBP18.96■□□□□ 0.63
CDK9-202ENST00000421939 AQP10Q96PS8 301 aa18.96■□□□□ 0.63
CDK9-202ENST00000421939 C11orf94C9JXX5 98 aa18.95■□□□□ 0.62
CDK9-202ENST00000421939 EMP1P54849 157 aa18.95■□□□□ 0.62
CDK9-202ENST00000421939 RRN3P1Q2M238 152 aa18.95■□□□□ 0.62
CDK9-202ENST00000421939 OR51M1Q9H341 326 aa18.95■□□□□ 0.62
CDK9-202ENST00000421939 LOC102723971A0A1B0GUV8 181 aa18.94■□□□□ 0.62
CDK9-202ENST00000421939 Q5BKY6 102 aa18.94■□□□□ 0.62
CDK9-202ENST00000421939 LINC00476Q8WZB0 136 aa18.94■□□□□ 0.62
CDK9-202ENST00000421939 HYDINQ4G0P3 5121 aa18.94■□□□□ 0.62
CDK9-202ENST00000421939 M0R3E3 92 aa18.93■□□□□ 0.62
CDK9-202ENST00000421939 CDKN1BP46527 198 aa18.93■□□□□ 0.62
CDK9-202ENST00000421939 C12orf74Q32Q52 190 aa18.93■□□□□ 0.62
CDK9-202ENST00000421939 C2CD4CQ8TF44 421 aa18.93■□□□□ 0.62
CDK9-202ENST00000421939 PAXXQ9BUH6 204 aa18.93■□□□□ 0.62
CDK9-202ENST00000421939 PRELID1Q9Y255 219 aa18.93■□□□□ 0.62
CDK9-202ENST00000421939 TRAV10A0A0B4J240 114 aa18.92■□□□□ 0.62
CDK9-202ENST00000421939 OR7C2O60412 319 aa18.92■□□□□ 0.62
CDK9-202ENST00000421939 NBEAP1P0C6P0 100 aa18.92■□□□□ 0.62
CDK9-202ENST00000421939 ZNF266Q14584 549 aa18.92■□□□□ 0.62
CDK9-202ENST00000421939 ZNF767PQ75MW2 155 aa18.92■□□□□ 0.62
CDK9-202ENST00000421939 RPP25LQ8N5L8 163 aaKnown RBP18.92■□□□□ 0.62
CDK9-202ENST00000421939 FXYD5Q96DB9 178 aa18.92■□□□□ 0.62
CDK9-202ENST00000421939 AAMDCQ9H7C9 122 aa18.92■□□□□ 0.62
CDK9-202ENST00000421939 NPIPB6E9PJ23 425 aa18.91■□□□□ 0.62
CDK9-202ENST00000421939 OR10J4P0C629 311 aa18.91■□□□□ 0.62
CDK9-202ENST00000421939 SPART-AS1P0CW21 52 aa18.91■□□□□ 0.62
CDK9-202ENST00000421939 EXOC3-AS1Q8N2X6 119 aa18.91■□□□□ 0.62
CDK9-202ENST00000421939 TEX48A0A1B0GUV7 120 aa18.9■□□□□ 0.62
CDK9-202ENST00000421939 TSPOP30536 169 aa18.9■□□□□ 0.62
CDK9-202ENST00000421939 TMEM256Q8N2U0 113 aa18.9■□□□□ 0.62
CDK9-202ENST00000421939 OR2T35Q8NGX2 323 aa18.9■□□□□ 0.62
CDK9-202ENST00000421939 RNF141Q8WVD5 230 aa18.9■□□□□ 0.62
CDK9-202ENST00000421939 DKK2Q9UBU2 259 aa18.9■□□□□ 0.62
CDK9-202ENST00000421939 ZNF705GA8MUZ8 300 aaPredicted RBP18.89■□□□□ 0.61
CDK9-202ENST00000421939 ACOT6Q3I5F7 207 aaPredicted RBP18.89■□□□□ 0.61
CDK9-202ENST00000421939 KHDC3LQ587J8 217 aa18.89■□□□□ 0.61
CDK9-202ENST00000421939 FAM222AQ5U5X8 452 aa18.89■□□□□ 0.61
CDK9-202ENST00000421939 ODF3Q96PU9 254 aa18.89■□□□□ 0.61
CDK9-202ENST00000421939 YTHDF2Q9Y5A9 579 aaKnown RBP18.89■□□□□ 0.61
CDK9-202ENST00000421939 FXYD6-FXYD2A0A087WZ82 144 aa18.88■□□□□ 0.61
CDK9-202ENST00000421939 CT45A10P0DMU9 189 aa18.88■□□□□ 0.61
CDK9-202ENST00000421939 M6PRP20645 277 aa18.88■□□□□ 0.61
CDK9-202ENST00000421939 TAS2R45P59539 299 aa18.88■□□□□ 0.61
CDK9-202ENST00000421939 UBE2L3P68036 154 aaKnown RBP18.88■□□□□ 0.61
CDK9-202ENST00000421939 ICAM4Q14773 271 aa18.88■□□□□ 0.61
CDK9-202ENST00000421939 INO80EQ8NBZ0 244 aaPredicted RBP18.88■□□□□ 0.61
CDK9-202ENST00000421939 ZNF503Q96F45 646 aa18.88■□□□□ 0.61
CDK9-202ENST00000421939 PHYHIPLQ96FC7 376 aa18.88■□□□□ 0.61
CDK9-202ENST00000421939 LY6G6CO95867 125 aa18.87■□□□□ 0.61
CDK9-202ENST00000421939 LINC01587Q99440 93 aa18.87■□□□□ 0.61
CDK9-202ENST00000421939 IGLL5B9A064 214 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 PRM2P04554 102 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 LEPP41159 167 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 TCTAP57738 103 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 RAB2AP61019 212 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 KIR3DS1Q14943 382 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 GFI1BQ5VTD9 330 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 HSD17B11Q8NBQ5 300 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 C20orf144Q9BQM9 153 aa18.86■□□□□ 0.61
CDK9-202ENST00000421939 DEFB131BA0A096LNP1 70 aa18.85■□□□□ 0.61
CDK9-202ENST00000421939 RNF222A6NCQ9 220 aa18.85■□□□□ 0.61
CDK9-202ENST00000421939 TAS2R60P59551 318 aa18.85■□□□□ 0.61
CDK9-202ENST00000421939 FAM122CQ6P4D5 195 aa18.85■□□□□ 0.61
CDK9-202ENST00000421939 NIPSNAP3BQ9BS92 247 aa18.85■□□□□ 0.61
CDK9-202ENST00000421939 TNFSF18Q9UNG2 199 aa18.85■□□□□ 0.61
CDK9-202ENST00000421939 EIF3GO75821 320 aaKnown RBP eCLIP18.84■□□□□ 0.61
CDK9-202ENST00000421939 ERCC8Q13216 396 aa18.84■□□□□ 0.61
CDK9-202ENST00000421939 OR2G3Q8NGZ4 309 aa18.84■□□□□ 0.61
CDK9-202ENST00000421939 PSMG3Q9BT73 122 aaPredicted RBP18.84■□□□□ 0.61
CDK9-202ENST00000421939 A0A1W2PPV4 95 aa18.83■□□□□ 0.6
CDK9-202ENST00000421939 G3V3Q6 166 aa18.83■□□□□ 0.6
CDK9-202ENST00000421939 H7BYZ3 331 aa18.83■□□□□ 0.6
CDK9-202ENST00000421939 IGKV2-40A0A087WW87 121 aaPredicted RBP18.82■□□□□ 0.6
CDK9-202ENST00000421939 J3KRW8 73 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 IGKV2D-40P01614 121 aaPredicted RBP18.82■□□□□ 0.6
CDK9-202ENST00000421939 AZU1P20160 251 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 ATP6V0CP27449 155 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 LYPD1Q8N2G4 141 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 OR10G4Q8NGN3 311 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 OR10G9Q8NGN4 311 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 OR10G7Q8NGN6 311 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 LINC00477Q96M19 166 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 AGPAT4-IT1Q9H0P7 198 aa18.82■□□□□ 0.6
CDK9-202ENST00000421939 RANP62826 216 aaKnown RBP18.81■□□□□ 0.6
CDK9-202ENST00000421939 PQLC2Q6ZP29 291 aa18.81■□□□□ 0.6
CDK9-202ENST00000421939 C9orf47Q6ZRZ4 202 aa18.81■□□□□ 0.6
CDK9-202ENST00000421939 Q9H3A6 140 aa18.81■□□□□ 0.6
CDK9-202ENST00000421939 IGHV4-4A0A075B6R2 117 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms