RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 TRAV12-3A0A0B4J271 114 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 A0A0B4J2A0 478 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 LOC100506127A0A0U1RQW1 187 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 C7orf71A4D174 169 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 K7EQD1 137 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 PRAF2O60831 178 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 CT45A10P0DMU9 189 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 GYPEP15421 78 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 TNFSF8P32971 234 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 SELENOTP62341 195 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 SRPXP78539 464 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 SSBP1Q04837 148 aaKnown RBP4.39□□□□□ -1.71
PMS1-208ENST00000421722 LAGE3Q14657 143 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 Q6ZRU5 148 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 MARCH1Q8TCQ1 289 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 ZNF431Q8TF32 576 aaPredicted RBP4.39□□□□□ -1.71
PMS1-208ENST00000421722 C15orf40Q8WUR7 153 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 CIB3Q96Q77 187 aaPredicted RBP4.39□□□□□ -1.71
PMS1-208ENST00000421722 SHPKQ9UHJ6 478 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 KCNIP3Q9Y2W7 256 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 DUXBA0A1W2PPF3 345 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 PRSS46E5RG02 174 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 GHRHP01286 108 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 NMBP08949 121 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 TAS2R19P59542 299 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
PMS1-208ENST00000421722 SNX29P2Q8IUI4 249 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 OR10G4Q8NGN3 311 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 MRPL53Q96EL3 112 aaKnown RBP4.39□□□□□ -1.71
PMS1-208ENST00000421722 MTFP1Q9UDX5 166 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 KLF12Q9Y4X4 402 aa4.39□□□□□ -1.71
PMS1-208ENST00000421722 TRAV8-6A0A0B4J262 113 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 A6NHS1 94 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 CD3DP04234 171 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 SLC25A6P12236 298 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 TEPPQ6URK8 271 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 NRG4Q8WWG1 115 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 CNBD2Q96M20 576 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 RAB26Q9ULW5 256 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 GPR132Q9UNW8 380 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 LRP1Q07954 4544 aaKnown RBP4.38□□□□□ -1.71
PMS1-208ENST00000421722 TRGV4A0A0C4DH28 118 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 IGHV3-38A0A0C4DH36 116 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 DISC1C4P0D8 188 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 C9JCJ5 164 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 K7EPK0 472 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 MPDU1O75352 247 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 PITX3O75364 302 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 RAB3DO95716 219 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 RPS19P39019 145 aaKnown RBP4.38□□□□□ -1.71
PMS1-208ENST00000421722 POLR2GP62487 172 aaKnown RBP eCLIP4.38□□□□□ -1.71
PMS1-208ENST00000421722 TMEM182Q6ZP80 229 aaPredicted RBP4.38□□□□□ -1.71
PMS1-208ENST00000421722 BLNKQ8WV28 456 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 SCGB3A2Q96PL1 93 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 PAXXQ9BUH6 204 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 SLC25A31Q9H0C2 315 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 COX11Q9Y6N1 276 aa4.38□□□□□ -1.71
PMS1-208ENST00000421722 KLLNB2CW77 178 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 FNDC10F2Z333 226 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 IGHV3-53P01767 116 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 AKR1C1Q04828 323 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 GUK1Q16774 197 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 SCGB2B2Q4G0G5 96 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 TOR2AQ5JU69 321 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 Q8N976 141 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 FAM19A4Q96LR4 140 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 LINC00477Q96M19 166 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 PRELID1Q9Y255 219 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 TNXBP22105 4242 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 PRAC2D3DTV9 90 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 ZNF253O75346 499 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 IL5P05113 134 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
PMS1-208ENST00000421722 GATA2P23769 480 aaPredicted RBP4.37□□□□□ -1.71
PMS1-208ENST00000421722 OR52I2Q8NH67 350 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 CIRBP-AS1Q8TBR5 109 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 SPXQ9BT56 116 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 PARD6GQ9BYG4 376 aaPredicted RBP4.37□□□□□ -1.71
PMS1-208ENST00000421722 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 TP53TG3Q9ULZ0 132 aa4.37□□□□□ -1.71
PMS1-208ENST00000421722 IGHV1OR15-1A0A075B7D0 117 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 TRAV8-3A0A0A6YYJ7 113 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 PMS2P5A8MQ11 134 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 OR5G3P0C626 314 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 LINC00869P0C866 280 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 ANXA3P12429 323 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 CRISP2P16562 243 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 ANXA7P20073 488 aaKnown RBP4.36□□□□□ -1.71
PMS1-208ENST00000421722 ZNF846Q147U1 533 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 MZT2AQ6P582 158 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 BPIFA4PQ86YQ2 179 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 SH3BGRL3Q9H299 93 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 DNAJC4Q9NNZ3 241 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 MRPL16Q9NX20 251 aaKnown RBP4.36□□□□□ -1.71
PMS1-208ENST00000421722 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
PMS1-208ENST00000421722 RNF222A6NCQ9 220 aa4.35□□□□□ -1.71
PMS1-208ENST00000421722 PFN1P07737 140 aaKnown RBP4.35□□□□□ -1.71
PMS1-208ENST00000421722 IAPPP10997 89 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms