RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 LOC102723971A0A1B0GUV8 181 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 SPART-AS1P0CW21 52 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 PDE6HQ13956 83 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 RRN3P1Q2M238 152 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 ZNF767PQ75MW2 155 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 MIR17HGQ75NE6 70 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 SMIM3Q9BZL3 60 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 PPP1R14DQ9NXH3 145 aa14.54□□□□□ -0.08
GTF3A-202ENST00000419181 NDUFB4O95168 129 aa14.53□□□□□ -0.08
GTF3A-202ENST00000419181 TCTAP57738 103 aa14.53□□□□□ -0.08
GTF3A-202ENST00000419181 OR10J6PQ8NGY7 276 aa14.53□□□□□ -0.08
GTF3A-202ENST00000419181 MRPL32Q9BYC8 188 aaKnown RBP14.53□□□□□ -0.08
GTF3A-202ENST00000419181 DKK2Q9UBU2 259 aa14.53□□□□□ -0.08
GTF3A-202ENST00000419181 TEX48A0A1B0GUV7 120 aa14.52□□□□□ -0.09
GTF3A-202ENST00000419181 IFNA5P01569 189 aa14.52□□□□□ -0.09
GTF3A-202ENST00000419181 CDKN1BP46527 198 aa14.52□□□□□ -0.09
GTF3A-202ENST00000419181 MRPL53Q96EL3 112 aaKnown RBP14.52□□□□□ -0.09
GTF3A-202ENST00000419181 PARD6GQ9BYG4 376 aaPredicted RBP14.52□□□□□ -0.09
GTF3A-202ENST00000419181 WFDC1Q9HC57 220 aa14.52□□□□□ -0.09
GTF3A-202ENST00000419181 YTHDF2Q9Y5A9 579 aaKnown RBP14.52□□□□□ -0.09
GTF3A-202ENST00000419181 IGLL5B9A064 214 aa14.51□□□□□ -0.09
GTF3A-202ENST00000419181 FAM222AQ5U5X8 452 aa14.51□□□□□ -0.09
GTF3A-202ENST00000419181 RPP25LQ8N5L8 163 aaKnown RBP14.51□□□□□ -0.09
GTF3A-202ENST00000419181 SCGB1C1Q8TD33 95 aa14.51□□□□□ -0.09
GTF3A-202ENST00000419181 APLNQ9ULZ1 77 aa14.51□□□□□ -0.09
GTF3A-202ENST00000419181 FUT9Q9Y231 359 aa14.51□□□□□ -0.09
GTF3A-202ENST00000419181 ZNF705GA8MUZ8 300 aaPredicted RBP14.5□□□□□ -0.09
GTF3A-202ENST00000419181 NPIPB6E9PJ23 425 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 M0R3E3 92 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 FFAR4Q5NUL3 377 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 LGALS9CQ6DKI2 356 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 TMEM256Q8N2U0 113 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 BLNKQ8WV28 456 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 OR51M1Q9H341 326 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 TIMM9Q9Y5J7 89 aa14.5□□□□□ -0.09
GTF3A-202ENST00000419181 DEFB131BA0A096LNP1 70 aa14.49□□□□□ -0.09
GTF3A-202ENST00000419181 PRM2P04554 102 aa14.49□□□□□ -0.09
GTF3A-202ENST00000419181 TSPOP30536 169 aa14.49□□□□□ -0.09
GTF3A-202ENST00000419181 RGS21Q2M5E4 152 aa14.49□□□□□ -0.09
GTF3A-202ENST00000419181 PRELID1Q9Y255 219 aa14.49□□□□□ -0.09
GTF3A-202ENST00000419181 GIPP09681 153 aaPredicted RBP14.48□□□□□ -0.09
GTF3A-202ENST00000419181 NBEAP1P0C6P0 100 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 KIR3DS1Q14943 382 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 EXOC3-AS1Q8N2X6 119 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 ASB13Q8WXK3 278 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 FXYD5Q96DB9 178 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 ODF3Q96PU9 254 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 NIPSNAP3BQ9BS92 247 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 PAXXQ9BUH6 204 aa14.48□□□□□ -0.09
GTF3A-202ENST00000419181 IGHV4-4A0A075B6R2 117 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 OR10J4P0C629 311 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 CT45A10P0DMU9 189 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 TAS2R60P59551 318 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 OXA1LQ15070 435 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 ZNF503Q96F45 646 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 AQP10Q96PS8 301 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 LINC01587Q99440 93 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 AAMDCQ9H7C9 122 aa14.47□□□□□ -0.09
GTF3A-202ENST00000419181 PLAC8L1A1L4L8 177 aa14.46□□□□□ -0.09
GTF3A-202ENST00000419181 AZU1P20160 251 aa14.46□□□□□ -0.09
GTF3A-202ENST00000419181 Q5BKY6 102 aa14.46□□□□□ -0.09
GTF3A-202ENST00000419181 GFI1BQ5VTD9 330 aa14.46□□□□□ -0.09
GTF3A-202ENST00000419181 RNF141Q8WVD5 230 aa14.46□□□□□ -0.09
GTF3A-202ENST00000419181 C20orf144Q9BQM9 153 aa14.46□□□□□ -0.09
GTF3A-202ENST00000419181 PLA2G2EQ9NZK7 142 aa14.46□□□□□ -0.09
GTF3A-202ENST00000419181 H7BYZ3 331 aa14.45□□□□□ -0.1
GTF3A-202ENST00000419181 OR7C2O60412 319 aa14.45□□□□□ -0.1
GTF3A-202ENST00000419181 ICAM4Q14773 271 aa14.45□□□□□ -0.1
GTF3A-202ENST00000419181 PHYHIPLQ96FC7 376 aa14.45□□□□□ -0.1
GTF3A-202ENST00000419181 KMT2AQ03164 3969 aa14.44□□□□□ -0.1
GTF3A-202ENST00000419181 LYRM9A8MSI8 78 aa14.44□□□□□ -0.1
GTF3A-202ENST00000419181 LEPP41159 167 aa14.44□□□□□ -0.1
GTF3A-202ENST00000419181 ERCC8Q13216 396 aa14.44□□□□□ -0.1
GTF3A-202ENST00000419181 KHDC3LQ587J8 217 aa14.44□□□□□ -0.1
GTF3A-202ENST00000419181 TAS2R45P59539 299 aa14.43□□□□□ -0.1
GTF3A-202ENST00000419181 UBE2L3P68036 154 aaKnown RBP14.43□□□□□ -0.1
GTF3A-202ENST00000419181 ZNF266Q14584 549 aa14.43□□□□□ -0.1
GTF3A-202ENST00000419181 FAM122CQ6P4D5 195 aa14.43□□□□□ -0.1
GTF3A-202ENST00000419181 FAM19A4Q96LR4 140 aa14.43□□□□□ -0.1
GTF3A-202ENST00000419181 LINC00477Q96M19 166 aa14.43□□□□□ -0.1
GTF3A-202ENST00000419181 HTN1P15515 57 aa14.42□□□□□ -0.1
GTF3A-202ENST00000419181 M6PRP20645 277 aa14.42□□□□□ -0.1
GTF3A-202ENST00000419181 DAD1P61803 113 aa14.42□□□□□ -0.1
GTF3A-202ENST00000419181 ACOT6Q3I5F7 207 aaPredicted RBP14.42□□□□□ -0.1
GTF3A-202ENST00000419181 C9orf47Q6ZRZ4 202 aa14.42□□□□□ -0.1
GTF3A-202ENST00000419181 RNASE8Q8TDE3 154 aaKnown RBP14.42□□□□□ -0.1
GTF3A-202ENST00000419181 C16orf74Q96GX8 76 aa14.42□□□□□ -0.1
GTF3A-202ENST00000419181 AGPAT4-IT1Q9H0P7 198 aa14.42□□□□□ -0.1
GTF3A-202ENST00000419181 VPS13DQ5THJ4 4388 aa14.42□□□□□ -0.1
GTF3A-202ENST00000419181 IGKV2-40A0A087WW87 121 aaPredicted RBP14.41□□□□□ -0.1
GTF3A-202ENST00000419181 J3KRW8 73 aa14.41□□□□□ -0.1
GTF3A-202ENST00000419181 IGKV2D-40P01614 121 aaPredicted RBP14.41□□□□□ -0.1
GTF3A-202ENST00000419181 RAB2AP61019 212 aa14.41□□□□□ -0.1
GTF3A-202ENST00000419181 ZNF493Q6ZR52 646 aa14.41□□□□□ -0.1
GTF3A-202ENST00000419181 LYPD1Q8N2G4 141 aa14.41□□□□□ -0.1
GTF3A-202ENST00000419181 TMEM263Q8WUH6 116 aaKnown RBP14.41□□□□□ -0.1
GTF3A-202ENST00000419181 NDUFAF3Q9BU61 184 aa14.41□□□□□ -0.1
GTF3A-202ENST00000419181 KLLNB2CW77 178 aa14.4□□□□□ -0.1
GTF3A-202ENST00000419181 EIF3GO75821 320 aaKnown RBP eCLIP14.4□□□□□ -0.1
GTF3A-202ENST00000419181 SLC25A5P05141 298 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms