RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 IGF1P05019 195 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 CRYBA1P05813 215 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR10J4P0C629 311 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 PYYP10082 97 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 AKR1C3P42330 323 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 ATP5G3P48201 142 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 PLP1P60201 277 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 YPEL3P61236 119 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 PNRC1Q12796 327 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 RHEBQ15382 184 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 GUCA2BQ16661 112 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 CLEC19AQ6UXS0 136 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF600Q6ZNG1 722 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 BPIFA4PQ86YQ2 179 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 SIGLECL1Q8N7X8 197 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR4F17Q8NGA8 305 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF502Q8TBZ5 544 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 SUN5Q8TC36 379 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 BLNKQ8WV28 456 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM37Q8WXS4 190 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 TVP23CQ96ET8 276 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 NOL4LQ96MY1 436 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 SMIM7Q9BQ49 75 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 C20orf24Q9BUV8 137 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 SCRT1Q9BWW7 348 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 SLC25A2Q9BXI2 301 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 SLC25A39Q9BZJ4 359 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 PARLQ9H300 379 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR51M1Q9H341 326 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPH3ALQ9UNE2 315 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 ARL2-SNX15V9GYD0 113 aa2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 KMT2BQ9UMN6 2715 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P20-201ENST00000417997 TPRP12270 2363 aaKnown RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 UBR5O95071 2799 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 TRBV9A0A0B4J1U6 114 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHV3-35A0A0C4DH35 117 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 A0A0G2JLM5 398 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 A0A1W2PRE2 83 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 PSMB11A5LHX3 300 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM74A7A6NL05 159 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 H3BQ15 152 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGKV1-17P01599 117 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHV3-11P01762 117 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 FCGR2BP31994 310 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 RAB9AP51151 201 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 CNN1P51911 297 aaKnown RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 UBE2G1P62253 170 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 BLCAPP62952 87 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 ADIRFQ15847 76 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 USF2Q15853 346 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM74A3Q4VXF1 159 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 C10orf91Q5T1B1 145 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 PATE2Q6UY27 113 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM86BQ8N661 226 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF491Q8N8L2 437 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 CMTM2Q8TAZ6 248 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF418Q8TF45 676 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 USMG5Q96IX5 58 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 METTL26Q96S19 204 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 ATP6V0BQ99437 205 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 SHANK2-AS3Q9BTD1 123 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 NAT8Q9UHE5 227 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 YTHDF2Q9Y5A9 579 aaKnown RBP2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 ADGRG4Q8IZF6 3080 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 NAV3Q8IVL0 2385 aa2.88□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF462Q96JM2 2506 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 TNCP24821 2201 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 IGHV3OR16-8A0A075B7F1 116 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 WI2-2373I1.2A0A1W2PRP0 233 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM89A2RUT3 159 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 C7orf77A4D0Y5 90 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 ZNF98A6NK75 572 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 B4DEV8 164 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 GGTLC3B5MD39 225 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 PPP5D1E7EU14 171 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 K7EQM0 130 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 PEX7O00628 323 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 BRI3O95415 125 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 NBEAP1P0C6P0 100 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 HIST1H1EP10412 219 aaKnown RBP2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 GP9P14770 177 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 RPL7P18124 248 aaKnown RBP2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 BMI1P35226 326 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 GALR1P47211 349 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 RANP62826 216 aaKnown RBP2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 BTN1A1Q13410 526 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 TMEM241Q24JQ0 296 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 KLK9Q2XQG4 91 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 LEMD1Q68G75 181 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 TEX38Q6PEX7 206 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 ATRAIDQ6UW56 229 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 CBLN2Q8IUK8 224 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR8I2Q8N0Y5 310 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 C5orf17Q8NAS9 161 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 OR4X2Q8NGF9 303 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 C11orf52Q96A22 123 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 FXYD5Q96DB9 178 aa2.87□□□□□ -1.95
HMGB3P20-201ENST00000417997 FAM167A-AS1Q96KT0 104 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms