RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 CDKN1BP46527 198 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 ANKRD39Q53RE8 183 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 AMN1Q8IY45 258 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 SIGLEC8Q9NYZ4 499 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 WNK2Q9Y3S1 2297 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 TMSB15BA0A087X1C1 80 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 TRAV8-6A0A0B4J262 113 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 SMKR1H3BMG3 65 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 PSG9Q00887 426 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 COTL1Q14019 142 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 Q8N6K4 173 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 VGLL1Q99990 258 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 CST9LQ9H4G1 147 aa7.68□□□□□ -1.18
SS18-203ENST00000415083 ATRXP46100 2492 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 IGHV3OR16-8A0A075B7F1 116 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 A0A1W2PPR1 153 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 D6R8Y8 96 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 SH2D1AO60880 128 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 LIPFP07098 398 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 SAPCD1Q5SSQ6 148 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 COX8CQ7Z4L0 72 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 Q8TAT8 98 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 SCNM1Q9BWG6 230 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 MAP1LC3CQ9BXW4 147 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 TMEM191AQ9H0A3 160 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 MSRB1Q9NZV6 116 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 MED13LQ71F56 2210 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 TRAV30A0A087WSZ9 112 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 CD3EP07766 207 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 PET117Q6UWS5 81 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 RNF5Q99942 180 aa7.67□□□□□ -1.18
SS18-203ENST00000415083 RHOGP84095 191 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 Q6ZQT7 251 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 DEFB125Q8N687 156 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 CNIH1O95406 144 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 CTSGP08311 255 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 ZFP36P26651 326 aaKnown RBP7.66□□□□□ -1.18
SS18-203ENST00000415083 C5orf64Q2M2E5 130 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 OR8A1Q8NGG7 326 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 SRSF8Q9BRL6 282 aaKnown RBP7.66□□□□□ -1.18
SS18-203ENST00000415083 NBASA2RRP1 2371 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 PRAC2D3DTV9 90 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 PLGLAQ15195 96 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 MRPL51Q4U2R6 128 aaKnown RBP7.66□□□□□ -1.18
SS18-203ENST00000415083 OCIAD2Q56VL3 154 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 C11orf71Q6IPW1 123 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 WFDC3Q8IUB2 231 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 LYPD1Q8N2G4 141 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 RNF185Q96GF1 192 aa7.66□□□□□ -1.18
SS18-203ENST00000415083 SERTM2A0A1B0GWG4 89 aa7.65□□□□□ -1.18
SS18-203ENST00000415083 FAM90A27PA6NNH2 459 aa7.65□□□□□ -1.18
SS18-203ENST00000415083 SAP30O75446 220 aa7.65□□□□□ -1.18
SS18-203ENST00000415083 OR5AL1P0C617 328 aa7.65□□□□□ -1.18
SS18-203ENST00000415083 FAM104BQ5XKR9 115 aa7.65□□□□□ -1.18
SS18-203ENST00000415083 VKORC1Q9BQB6 163 aa7.65□□□□□ -1.18
SS18-203ENST00000415083 DPM3Q9P2X0 92 aa7.65□□□□□ -1.18
SS18-203ENST00000415083 NPIPB5A8MRT5 1133 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 NPYP01303 97 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 IGLC6P0CF74 106 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 COX8AP10176 69 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 GPR183P32249 361 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 TTC9CQ8N5M4 171 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 PRSS3P2Q8NHM4 247 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 PRR25Q96S07 402 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 AP5S1Q9NUS5 200 aa7.65□□□□□ -1.19
SS18-203ENST00000415083 MAP1AP78559 2803 aaPredicted RBP7.64□□□□□ -1.19
SS18-203ENST00000415083 IGHV3-35A0A0C4DH35 117 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 GAGE12BA1L429 117 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 ADORA2A-AS1P86434 159 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 ZNF48Q96MX3 618 aaPredicted RBP7.64□□□□□ -1.19
SS18-203ENST00000415083 LINC01548A6NM66 108 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 RIPPLY3P57055 190 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 ERCC8Q13216 396 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 PRSS57Q6UWY2 283 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 C12orf54Q6X4T0 127 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 C11orf21Q9P2W6 132 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 ABCA2Q9BZC7 2435 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 IGHV7-81A0A0B4J1V7 117 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 CLPSL1A2RUU4 121 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 C7orf71A4D174 169 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 RIGQ13278 110 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 RAB37Q96AX2 223 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 MSRB2Q9Y3D2 182 aa7.64□□□□□ -1.19
SS18-203ENST00000415083 IGF2RP11717 2491 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 NDUFS7O75251 213 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 FAM162BQ5T6X4 162 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 ZNF562Q6V9R5 426 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 K7ENP7 123 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 GATA1P15976 413 aaPredicted RBP7.63□□□□□ -1.19
SS18-203ENST00000415083 FBXL19-AS1Q494R0 122 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 JMJD8Q96S16 334 aa7.63□□□□□ -1.19
SS18-203ENST00000415083 GNG7O60262 68 aa7.62□□□□□ -1.19
SS18-203ENST00000415083 PDE6HQ13956 83 aa7.62□□□□□ -1.19
SS18-203ENST00000415083 FA2HQ7L5A8 372 aa7.62□□□□□ -1.19
SS18-203ENST00000415083 ARPC1AQ92747 370 aa7.62□□□□□ -1.19
SS18-203ENST00000415083 MS4A6AQ9H2W1 248 aa7.62□□□□□ -1.19
SS18-203ENST00000415083 ZFAND3Q9H8U3 227 aa7.62□□□□□ -1.19
SS18-203ENST00000415083 HSPB8Q9UJY1 196 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms