RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 UNC119Q13432 240 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF266Q14584 549 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 ADIRFQ15847 76 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 Q499Y3 187 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 TMEM155Q4W5P6 130 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 TMEM97Q5BJF2 176 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 SPATA31B1PQ5VZV4 182 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF788Q6ZQV5 615 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 LHFPL1Q86WI0 220 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 FAM216BQ8N7L0 139 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 SIGLECL1Q8N7X8 197 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 OR51T1Q8NGJ9 327 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 OR2K2Q8NGT1 345 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 OR5H2Q8NGV7 314 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 SGMS2Q8NHU3 365 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 FAM213BQ8TBF2 198 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 TMEM230Q96A57 120 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 ABHD14BQ96IU4 210 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 CCL13Q99616 98 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 C1QTNF4Q9BXJ3 329 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 OR51I2Q9H344 312 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 SPANXCQ9NY87 97 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 TAS2R4Q9NYW5 299 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 CYSLTR1Q9Y271 337 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 LINC00312Q9Y6C7 94 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 JMJD1CQ15652 2540 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 ARHGAP32A7KAX9 2087 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 IGKV1D-17A0A075B6S4 117 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 IGHV3OR16-10A0A075B7F0 116 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 LOC102724200A0A096LPH7 203 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 TEX48A0A1B0GUV7 120 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 LYRM9A8MSI8 78 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 SRRM5B3KS81 715 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 B4DSR2 109 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 J3QT63 122 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 DEGS1O15121 323 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 MRPS12O15235 138 aaKnown RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 ANGPTL7O43827 346 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 PITX3O75364 302 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 CRLF1O75462 422 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 SERF1AO75920 110 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 CNIH1O95406 144 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 KRASP01116 189 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 LHBP01229 141 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 ISG15P05161 165 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 FRMD6-AS1P0C7T7 363 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 C3orf79P0CE67 100 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 HIST1H1DP16402 221 aaKnown RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 IGFBP3P17936 291 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 MDKP21741 143 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 NPY1RP25929 384 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 CRYBB3P26998 211 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 KIR2DS4P43632 304 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 PAX9P55771 341 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 TCL1AP56279 114 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 RPL23P62829 140 aaKnown RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 PRB3Q04118 309 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 KLRD1Q13241 179 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 MPV17L2Q567V2 206 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 FAM162BQ5T6X4 162 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 TEX36Q5VZQ5 186 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 CRIP3Q6Q6R5 217 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 MOB1BQ7L9L4 216 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 OR8B3Q8NGG8 313 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 OR4A5Q8NH83 315 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 ATP6V0E2Q8NHE4 81 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 VSTM2AQ8TAG5 236 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 GATAD1Q8WUU5 269 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 RASL10AQ92737 203 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 EEF1AKMT3Q96AZ1 226 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 BORCS8Q96FH0 119 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 DNAJC30Q96LL9 226 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 GAFA1Q96PS6 74 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 OR8B2Q96RD0 313 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 GPER1Q99527 375 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 SSBP3Q9BWW4 388 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 MS4A6AQ9H2W1 248 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 SPANXB1Q9NS25 103 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-202ENST00000409915 EHFQ9NZC4 300 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 THYN1Q9P016 225 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 MXRA5Q9NR99 2828 aa3.56□□□□□ -1.84
SF3B1-202ENST00000409915 IGLV5-52A0A0A0MRZ9 124 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 MUC21A0A0G2JKD1 596 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 MUC21A0A140T8X8 626 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 C7orf71A4D174 169 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 SMIM9A6NGZ8 99 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 F8W1H4 67 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 OR9G9P0C7N8 305 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 IGLL1P15814 213 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 CRISP2P16562 243 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF93P35789 620 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-202ENST00000409915 OR3A4PP47883 348 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 DLX1P56177 255 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 ECSCRQ19T08 205 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 MUC21Q5SSG8 566 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms