RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 DNAJC9-AS1A6NH13 148 aa13.23□□□□□ -0.29
GCFC2-202ENST00000409857 KLHDC1Q8N7A1 406 aa13.23□□□□□ -0.29
GCFC2-202ENST00000409857 OR1L4Q8NGR5 311 aa13.23□□□□□ -0.29
GCFC2-202ENST00000409857 VPREB3Q9UKI3 123 aa13.23□□□□□ -0.29
GCFC2-202ENST00000409857 IGHV3-21A0A0B4J1V1 117 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 SLC25A5P05141 298 aaKnown RBP13.22□□□□□ -0.29
GCFC2-202ENST00000409857 IGLL1P15814 213 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 FOXA3P55318 350 aaPredicted RBP13.22□□□□□ -0.29
GCFC2-202ENST00000409857 TMEM177Q53S58 311 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 RASL11AQ6T310 242 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 UNQ5815/PRO19632Q6UWF5 114 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 ESM1Q9NQ30 184 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 PGPA6NDG6 321 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 C2orf70A6NJV1 201 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 MYCNOSP40205 109 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 UBE2G1P62253 170 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 KLF5Q13887 457 aaPredicted RBP13.22□□□□□ -0.29
GCFC2-202ENST00000409857 OR1B1Q8NGR6 318 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 EPDR1Q9UM22 224 aa13.22□□□□□ -0.29
GCFC2-202ENST00000409857 A6NDX4 124 aa13.21□□□□□ -0.29
GCFC2-202ENST00000409857 PDPNQ86YL7 162 aa13.21□□□□□ -0.29
GCFC2-202ENST00000409857 TMEM167AQ8TBQ9 72 aa13.21□□□□□ -0.29
GCFC2-202ENST00000409857 WASHC3Q9Y3C0 194 aa13.21□□□□□ -0.29
GCFC2-202ENST00000409857 SLC25A17O43808 307 aa13.21□□□□□ -0.29
GCFC2-202ENST00000409857 IGLV2-23P01705 113 aa13.21□□□□□ -0.29
GCFC2-202ENST00000409857 HIST1H1EP10412 219 aaKnown RBP13.21□□□□□ -0.29
GCFC2-202ENST00000409857 LEMD1Q68G75 181 aa13.21□□□□□ -0.29
GCFC2-202ENST00000409857 NIPBLQ6KC79 2804 aaeCLIP13.21□□□□□ -0.29
GCFC2-202ENST00000409857 TRAV9-2A0A087WT02 112 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 OR2J3O76001 311 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 RNASE1P07998 156 aaKnown RBP13.2□□□□□ -0.3
GCFC2-202ENST00000409857 Q8N6K4 173 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 OR4C13Q8NGP0 309 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 RNF5Q99942 180 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 IGHV3-72A0A0B4J1Y9 119 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 A0A1B0GXF2 115 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 CCL25O15444 150 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 LINC00173Q6ZV60 143 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 THAP8Q8NA92 274 aa13.2□□□□□ -0.3
GCFC2-202ENST00000409857 CDKN1BP46527 198 aa13.19□□□□□ -0.3
GCFC2-202ENST00000409857 GTSF1Q8WW33 167 aa13.19□□□□□ -0.3
GCFC2-202ENST00000409857 CUBNO60494 3623 aa13.19□□□□□ -0.3
GCFC2-202ENST00000409857 PGLYRP4Q96LB8 373 aa13.19□□□□□ -0.3
GCFC2-202ENST00000409857 INS-IGF2F8WCM5 200 aa13.18□□□□□ -0.3
GCFC2-202ENST00000409857 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
GCFC2-202ENST00000409857 TMEM11P17152 192 aa13.18□□□□□ -0.3
GCFC2-202ENST00000409857 OR4F17Q8NGA8 305 aa13.18□□□□□ -0.3
GCFC2-202ENST00000409857 C20orf202A1L168 122 aa13.18□□□□□ -0.3
GCFC2-202ENST00000409857 HES1Q14469 280 aa13.18□□□□□ -0.3
GCFC2-202ENST00000409857 LY6EQ16553 131 aa13.18□□□□□ -0.3
GCFC2-202ENST00000409857 MRGPRG-AS1Q2M3A8 158 aa13.18□□□□□ -0.3
GCFC2-202ENST00000409857 MRPS16Q9Y3D3 137 aaKnown RBP13.18□□□□□ -0.3
GCFC2-202ENST00000409857 NBEAP1P0C6P0 100 aa13.17□□□□□ -0.3
GCFC2-202ENST00000409857 SUB1P53999 127 aaKnown RBP eCLIP13.17□□□□□ -0.3
GCFC2-202ENST00000409857 GPR82Q96P67 336 aa13.17□□□□□ -0.3
GCFC2-202ENST00000409857 MLST8Q9BVC4 326 aa13.17□□□□□ -0.3
GCFC2-202ENST00000409857 PTTG1IPP53801 180 aa13.17□□□□□ -0.3
GCFC2-202ENST00000409857 HBBP68871 147 aa13.17□□□□□ -0.3
GCFC2-202ENST00000409857 FBLN7Q53RD9 439 aa13.17□□□□□ -0.3
GCFC2-202ENST00000409857 ETFRF1Q6IPR1 90 aa13.17□□□□□ -0.3
GCFC2-202ENST00000409857 RPP21Q9H633 154 aaKnown RBP13.17□□□□□ -0.3
GCFC2-202ENST00000409857 NPBQ8NG41 125 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 VSTM2AQ8TAG5 236 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 CHRDL1Q9BU40 450 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 C1RLQ9NZP8 487 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 KLF12Q9Y4X4 402 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 ATP5L2Q7Z4Y8 100 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 ORAOV1Q8WV07 137 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 DUX5Q96PT3 197 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 MCRIP2Q9BUT9 160 aaKnown RBP13.16□□□□□ -0.3
GCFC2-202ENST00000409857 MOB4Q9Y3A3 225 aa13.16□□□□□ -0.3
GCFC2-202ENST00000409857 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 IGHV1-24A0A0C4DH33 117 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 CNTFRP26992 372 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 LGALS7P47929 136 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 ZNF138P52744 262 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 ERASQ7Z444 233 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 TMEM219Q86XT9 240 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 NF1P21359 2839 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 hDV102S1A0JD36 115 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 IGLC7A0M8Q6 106 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 P01737 135 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 PRSS22Q9GZN4 317 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 COX11Q9Y6N1 276 aa13.15□□□□□ -0.3
GCFC2-202ENST00000409857 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
GCFC2-202ENST00000409857 NDUFA3O95167 84 aa13.14□□□□□ -0.31
GCFC2-202ENST00000409857 PRIMA1Q86XR5 153 aa13.14□□□□□ -0.31
GCFC2-202ENST00000409857 Q9H3A6 140 aa13.14□□□□□ -0.31
GCFC2-202ENST00000409857 SETD2Q9BYW2 2564 aaPredicted RBP13.14□□□□□ -0.31
GCFC2-202ENST00000409857 C19orf71A6NCJ1 209 aa13.14□□□□□ -0.31
GCFC2-202ENST00000409857 GP9P14770 177 aa13.14□□□□□ -0.31
GCFC2-202ENST00000409857 ASCL2Q99929 193 aa13.14□□□□□ -0.31
GCFC2-202ENST00000409857 NBR2O15453 112 aa13.13□□□□□ -0.31
GCFC2-202ENST00000409857 LTAP01374 205 aa13.13□□□□□ -0.31
GCFC2-202ENST00000409857 A8MWL6 223 aa13.13□□□□□ -0.31
GCFC2-202ENST00000409857 K7EP13 123 aa13.13□□□□□ -0.31
GCFC2-202ENST00000409857 TOMM40O96008 361 aa13.13□□□□□ -0.31
GCFC2-202ENST00000409857 TCRAP04437 139 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms