RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TRAV12-2A0A075B6T6 113 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 FXYD6-FXYD2A0A087WZ82 144 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 CRXO43186 299 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 JTBO76095 146 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 HBE1P02100 147 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 EMP1P54849 157 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 ZNF266Q14584 549 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 BAP18Q8IXM2 172 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 RNF141Q8WVD5 230 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 DYNC2H1Q8NCM8 4307 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 OR7C2O60412 319 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 OR10J4P0C629 311 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 MRPL53Q96EL3 112 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 AAMDCQ9H7C9 122 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 PRELID1Q9Y255 219 aa12.91□□□□□ -0.34
PDLIM2-206ENST00000409141 M0R3E3 92 aa12.9□□□□□ -0.34
PDLIM2-206ENST00000409141 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
PDLIM2-206ENST00000409141 ACOT6Q3I5F7 207 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-206ENST00000409141 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
PDLIM2-206ENST00000409141 HSD17B11Q8NBQ5 300 aa12.9□□□□□ -0.34
PDLIM2-206ENST00000409141 CELA1Q9UNI1 258 aa12.9□□□□□ -0.34
PDLIM2-206ENST00000409141 M6PRP20645 277 aa12.89□□□□□ -0.35
PDLIM2-206ENST00000409141 CDKN1BP46527 198 aa12.89□□□□□ -0.35
PDLIM2-206ENST00000409141 TAS2R45P59539 299 aa12.89□□□□□ -0.35
PDLIM2-206ENST00000409141 RPP25LQ8N5L8 163 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-206ENST00000409141 FXYD5Q96DB9 178 aa12.89□□□□□ -0.35
PDLIM2-206ENST00000409141 TNFSF18Q9UNG2 199 aa12.89□□□□□ -0.35
PDLIM2-206ENST00000409141 LOC102723971A0A1B0GUV8 181 aa12.88□□□□□ -0.35
PDLIM2-206ENST00000409141 A0A1W2PPV4 95 aa12.88□□□□□ -0.35
PDLIM2-206ENST00000409141 C11orf94C9JXX5 98 aa12.88□□□□□ -0.35
PDLIM2-206ENST00000409141 TSPOP30536 169 aa12.88□□□□□ -0.35
PDLIM2-206ENST00000409141 ICAM4Q14773 271 aa12.88□□□□□ -0.35
PDLIM2-206ENST00000409141 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
PDLIM2-206ENST00000409141 RYR3Q15413 4870 aa12.88□□□□□ -0.35
PDLIM2-206ENST00000409141 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 ZNF705GA8MUZ8 300 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 NPIPB6E9PJ23 425 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 RAB2AP61019 212 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 Q6ZTC4 211 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 ZNF767PQ75MW2 155 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 ZNF503Q96F45 646 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 LINC01587Q99440 93 aa12.87□□□□□ -0.35
PDLIM2-206ENST00000409141 EIF3GO75821 320 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 CT45A10P0DMU9 189 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 UBE2L3P68036 154 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 C12orf74Q32Q52 190 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 FAM122CQ6P4D5 195 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 OR10G4Q8NGN3 311 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 OR10G9Q8NGN4 311 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 OR10G7Q8NGN6 311 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 C2CD4CQ8TF44 421 aa12.86□□□□□ -0.35
PDLIM2-206ENST00000409141 PRM2P04554 102 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 ATP6V0CP27449 155 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 LEPP41159 167 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 RANP62826 216 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 ERCC8Q13216 396 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 PHYHIPLQ96FC7 376 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 PSMG3Q9BT73 122 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 YTHDF2Q9Y5A9 579 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 BORCS7-ASMTA0A0B4J1R7 106 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 TRAV10A0A0B4J240 114 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 G3V3Q6 166 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 J3KRW8 73 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 HTN1P15515 57 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 KIR3DS1Q14943 382 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 FAM222AQ5U5X8 452 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 RPL7L1Q6DKI1 246 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 OR2G3Q8NGZ4 309 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 LINC00477Q96M19 166 aa12.85□□□□□ -0.35
PDLIM2-206ENST00000409141 TEX48A0A1B0GUV7 120 aa12.84□□□□□ -0.35
PDLIM2-206ENST00000409141 LYPD1Q8N2G4 141 aa12.84□□□□□ -0.35
PDLIM2-206ENST00000409141 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
PDLIM2-206ENST00000409141 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
PDLIM2-206ENST00000409141 DKK2Q9UBU2 259 aa12.84□□□□□ -0.35
PDLIM2-206ENST00000409141 IGLL5B9A064 214 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 SMLR1H3BR10 107 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 HMGB3O15347 200 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 ARPC5O15511 151 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 AZU1P20160 251 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 CSN1S1P47710 185 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 TAS2R60P59551 318 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 SERF2P84101 59 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 GFI1BQ5VTD9 330 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 PQLC2Q6ZP29 291 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 SH3BGRL3Q9H299 93 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 Q9H3A6 140 aa12.83□□□□□ -0.36
PDLIM2-206ENST00000409141 IGKV2-40A0A087WW87 121 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 IGKV2D-40P01614 121 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 MBP02144 154 aa12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 C9orf47Q6ZRZ4 202 aa12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 GNPNAT1Q96EK6 184 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 LYSTQ99698 3801 aa12.82□□□□□ -0.36
PDLIM2-206ENST00000409141 RYR2Q92736 4967 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms