RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TMEM14CQ9P0S9 112 aa12.55□□□□□ -0.4
UPK3A-202ENST00000396082 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
UPK3A-202ENST00000396082 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
UPK3A-202ENST00000396082 ZNF253O75346 499 aa12.54□□□□□ -0.4
UPK3A-202ENST00000396082 PYYP10082 97 aa12.54□□□□□ -0.4
UPK3A-202ENST00000396082 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
UPK3A-202ENST00000396082 CDKN1BP46527 198 aa12.54□□□□□ -0.4
UPK3A-202ENST00000396082 FAM222AQ5U5X8 452 aa12.54□□□□□ -0.4
UPK3A-202ENST00000396082 MIR17HGQ75NE6 70 aa12.54□□□□□ -0.4
UPK3A-202ENST00000396082 MRPL32Q9BYC8 188 aaKnown RBP12.54□□□□□ -0.4
UPK3A-202ENST00000396082 YTHDF2Q9Y5A9 579 aaKnown RBP12.54□□□□□ -0.4
UPK3A-202ENST00000396082 TRBV19A0A075B6N1 114 aa12.53□□□□□ -0.4
UPK3A-202ENST00000396082 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
UPK3A-202ENST00000396082 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
UPK3A-202ENST00000396082 TSPOP30536 169 aa12.53□□□□□ -0.4
UPK3A-202ENST00000396082 LGALS9CQ6DKI2 356 aa12.53□□□□□ -0.4
UPK3A-202ENST00000396082 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
UPK3A-202ENST00000396082 LINC01587Q99440 93 aa12.53□□□□□ -0.4
UPK3A-202ENST00000396082 SLC25A2Q9BXI2 301 aa12.53□□□□□ -0.4
UPK3A-202ENST00000396082 DKK2Q9UBU2 259 aa12.53□□□□□ -0.4
UPK3A-202ENST00000396082 IGHV4-4A0A075B6R2 117 aa12.52□□□□□ -0.41
UPK3A-202ENST00000396082 PDE6HQ13956 83 aa12.52□□□□□ -0.41
UPK3A-202ENST00000396082 FCN2Q15485 313 aa12.52□□□□□ -0.41
UPK3A-202ENST00000396082 FFAR4Q5NUL3 377 aa12.52□□□□□ -0.41
UPK3A-202ENST00000396082 TMEM256Q8N2U0 113 aa12.52□□□□□ -0.41
UPK3A-202ENST00000396082 NIPSNAP3BQ9BS92 247 aa12.52□□□□□ -0.41
UPK3A-202ENST00000396082 AAMDCQ9H7C9 122 aa12.52□□□□□ -0.41
UPK3A-202ENST00000396082 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.41
UPK3A-202ENST00000396082 DNAH1Q9P2D7 4330 aa12.51□□□□□ -0.41
UPK3A-202ENST00000396082 HTN1P15515 57 aa12.51□□□□□ -0.41
UPK3A-202ENST00000396082 MRPL53Q96EL3 112 aaKnown RBP12.51□□□□□ -0.41
UPK3A-202ENST00000396082 PARD6GQ9BYG4 376 aaPredicted RBP12.51□□□□□ -0.41
UPK3A-202ENST00000396082 OR51M1Q9H341 326 aa12.51□□□□□ -0.41
UPK3A-202ENST00000396082 APLNQ9ULZ1 77 aa12.51□□□□□ -0.41
UPK3A-202ENST00000396082 FUT9Q9Y231 359 aa12.51□□□□□ -0.41
UPK3A-202ENST00000396082 PRELID1Q9Y255 219 aa12.51□□□□□ -0.41
UPK3A-202ENST00000396082 J3KRW8 73 aa12.5□□□□□ -0.41
UPK3A-202ENST00000396082 M0R3E3 92 aa12.5□□□□□ -0.41
UPK3A-202ENST00000396082 OR7C2O60412 319 aa12.5□□□□□ -0.41
UPK3A-202ENST00000396082 PRM2P04554 102 aa12.5□□□□□ -0.41
UPK3A-202ENST00000396082 FAM167A-AS1Q96KT0 104 aa12.5□□□□□ -0.41
UPK3A-202ENST00000396082 PAXXQ9BUH6 204 aa12.5□□□□□ -0.41
UPK3A-202ENST00000396082 NDUFB4O95168 129 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 OR10J4P0C629 311 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 HTN3P15516 51 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 LEPP41159 167 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 TAS2R60P59551 318 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 DAD1P61803 113 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 EXOC3-AS1Q8N2X6 119 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 PLA2G2EQ9NZK7 142 aa12.49□□□□□ -0.41
UPK3A-202ENST00000396082 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 H7BYZ3 331 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 NBEAP1P0C6P0 100 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 TAS2R45P59539 299 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 ICAM4Q14773 271 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 RGS21Q2M5E4 152 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 RNF141Q8WVD5 230 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 NDUFAF3Q9BU61 184 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 WFDC1Q9HC57 220 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 HYDINQ4G0P3 5121 aa12.48□□□□□ -0.41
UPK3A-202ENST00000396082 UBE2L3P68036 154 aaKnown RBP12.47□□□□□ -0.41
UPK3A-202ENST00000396082 KIR3DS1Q14943 382 aa12.47□□□□□ -0.41
UPK3A-202ENST00000396082 OXA1LQ15070 435 aa12.47□□□□□ -0.41
UPK3A-202ENST00000396082 KHDC3LQ587J8 217 aa12.47□□□□□ -0.41
UPK3A-202ENST00000396082 GFI1BQ5VTD9 330 aa12.47□□□□□ -0.41
UPK3A-202ENST00000396082 FAM122CQ6P4D5 195 aa12.47□□□□□ -0.41
UPK3A-202ENST00000396082 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
UPK3A-202ENST00000396082 ODF3Q96PU9 254 aa12.47□□□□□ -0.41
UPK3A-202ENST00000396082 LYRM9A8MSI8 78 aa12.46□□□□□ -0.41
UPK3A-202ENST00000396082 GIPP09681 153 aaPredicted RBP12.46□□□□□ -0.41
UPK3A-202ENST00000396082 CT45A10P0DMU9 189 aa12.46□□□□□ -0.41
UPK3A-202ENST00000396082 AZU1P20160 251 aa12.46□□□□□ -0.41
UPK3A-202ENST00000396082 ZNF266Q14584 549 aa12.46□□□□□ -0.41
UPK3A-202ENST00000396082 ACOT6Q3I5F7 207 aaPredicted RBP12.46□□□□□ -0.41
UPK3A-202ENST00000396082 FXYD5Q96DB9 178 aa12.46□□□□□ -0.41
UPK3A-202ENST00000396082 ERCC8Q13216 396 aa12.45□□□□□ -0.42
UPK3A-202ENST00000396082 CCDC28AQ8IWP9 274 aa12.45□□□□□ -0.42
UPK3A-202ENST00000396082 ASB13Q8WXK3 278 aa12.45□□□□□ -0.42
UPK3A-202ENST00000396082 PHYHIPLQ96FC7 376 aa12.45□□□□□ -0.42
UPK3A-202ENST00000396082 LINC00477Q96M19 166 aa12.45□□□□□ -0.42
UPK3A-202ENST00000396082 IGKV2-40A0A087WW87 121 aaPredicted RBP12.44□□□□□ -0.42
UPK3A-202ENST00000396082 TRAV12-3A0A0B4J271 114 aa12.44□□□□□ -0.42
UPK3A-202ENST00000396082 A0A1W2PPV4 95 aa12.44□□□□□ -0.42
UPK3A-202ENST00000396082 IGKV2D-40P01614 121 aaPredicted RBP12.44□□□□□ -0.42
UPK3A-202ENST00000396082 DEFB130BP0DP73 79 aa12.44□□□□□ -0.42
UPK3A-202ENST00000396082 DEFB130AP0DP74 79 aa12.44□□□□□ -0.42
UPK3A-202ENST00000396082 RANP62826 216 aaKnown RBP12.44□□□□□ -0.42
UPK3A-202ENST00000396082 TMEM78Q5T7P6 136 aa12.44□□□□□ -0.42
UPK3A-202ENST00000396082 ZNF493Q6ZR52 646 aa12.44□□□□□ -0.42
UPK3A-202ENST00000396082 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
UPK3A-202ENST00000396082 AQP10Q96PS8 301 aa12.44□□□□□ -0.42
UPK3A-202ENST00000396082 M6PRP20645 277 aa12.43□□□□□ -0.42
UPK3A-202ENST00000396082 CSN1S1P47710 185 aa12.43□□□□□ -0.42
UPK3A-202ENST00000396082 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
UPK3A-202ENST00000396082 INO80EQ8NBZ0 244 aaPredicted RBP12.43□□□□□ -0.42
UPK3A-202ENST00000396082 AGPAT4-IT1Q9H0P7 198 aa12.43□□□□□ -0.42
UPK3A-202ENST00000396082 FXYD6-FXYD2A0A087WZ82 144 aa12.42□□□□□ -0.42
UPK3A-202ENST00000396082 PLAC8L1A1L4L8 177 aa12.42□□□□□ -0.42
UPK3A-202ENST00000396082 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms