RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 H3BRN7 92 aa10.84□□□□□ -0.67
SNCA-205ENST00000394991 SMR3BP02814 79 aaPredicted RBP10.84□□□□□ -0.67
SNCA-205ENST00000394991 IFITM3Q01628 133 aa10.84□□□□□ -0.67
SNCA-205ENST00000394991 KIR3DS1Q14943 382 aa10.84□□□□□ -0.67
SNCA-205ENST00000394991 ACOT7LQ6ZUV0 252 aa10.84□□□□□ -0.67
SNCA-205ENST00000394991 TMEM147Q9BVK8 224 aa10.84□□□□□ -0.67
SNCA-205ENST00000394991 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
SNCA-205ENST00000394991 LSM5Q9Y4Y9 91 aaKnown RBP10.84□□□□□ -0.67
SNCA-205ENST00000394991 GAGE12BA1L429 117 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 L7N2F9 121 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 CCNKO75909 580 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 GAGE7O76087 117 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 MBPP02686 304 aaPredicted RBP10.83□□□□□ -0.68
SNCA-205ENST00000394991 METTL15P1P0C7V9 234 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 GAGE12FP0CL80 117 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 GAGE12GP0CL81 117 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 GAGE12IP0CL82 117 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 DNAH10OSP0CZ25 163 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 CXCL3P19876 107 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 ERVFC1-1P60608 527 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 VAMP2P63027 116 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 BPIFCQ8NFQ6 507 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 PPP1R14DQ9NXH3 145 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.68
SNCA-205ENST00000394991 A0A096LPF7 62 aa10.82□□□□□ -0.68
SNCA-205ENST00000394991 H7BYZ3 331 aa10.82□□□□□ -0.68
SNCA-205ENST00000394991 CDKN1BP46527 198 aa10.82□□□□□ -0.68
SNCA-205ENST00000394991 RRAS2P62070 204 aaPredicted RBP10.82□□□□□ -0.68
SNCA-205ENST00000394991 PSG3Q16557 428 aa10.82□□□□□ -0.68
SNCA-205ENST00000394991 VSIG2Q96IQ7 327 aa10.82□□□□□ -0.68
SNCA-205ENST00000394991 PARD6GQ9BYG4 376 aaPredicted RBP10.82□□□□□ -0.68
SNCA-205ENST00000394991 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 EREGO14944 169 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 TSC22D2O75157 780 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 IL5P05113 134 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 BCAP31P51572 246 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 TAS2R30P59541 319 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 TMEM14EPQ6UXP3 125 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 NRARPQ7Z6K4 114 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 OR10P1Q8NGE3 313 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 C2orf50Q96LR7 162 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 TMPRSS5Q9H3S3 457 aa10.81□□□□□ -0.68
SNCA-205ENST00000394991 GPN1Q9HCN4 374 aaPredicted RBP10.81□□□□□ -0.68
SNCA-205ENST00000394991 A0A087X0K7 114 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 C7orf66A4D0T2 115 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 K7EPK0 472 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 SIVA1O15304 175 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 RLN2P04090 185 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 DEFA1P59665 94 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 DEFA3P59666 94 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 S100A10P60903 97 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 HAMPP81172 84 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 ICAM4Q14773 271 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 GFI1BQ5VTD9 330 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 MGAT4CQ9UBM8 478 aa10.8□□□□□ -0.68
SNCA-205ENST00000394991 A0A087WTM6 91 aa10.79□□□□□ -0.68
SNCA-205ENST00000394991 INMT-MINDY4F8WBC2 141 aa10.79□□□□□ -0.68
SNCA-205ENST00000394991 RPL7P18124 248 aaKnown RBP10.79□□□□□ -0.68
SNCA-205ENST00000394991 Q6ZTI0 123 aa10.79□□□□□ -0.68
SNCA-205ENST00000394991 RPUSD4Q96CM3 377 aaKnown RBP10.79□□□□□ -0.68
SNCA-205ENST00000394991 C20orf144Q9BQM9 153 aa10.79□□□□□ -0.68
SNCA-205ENST00000394991 PVALBP20472 110 aaPredicted RBP10.78□□□□□ -0.68
SNCA-205ENST00000394991 S100A7P31151 101 aa10.78□□□□□ -0.68
SNCA-205ENST00000394991 CAV2P51636 162 aa10.78□□□□□ -0.68
SNCA-205ENST00000394991 CYP2G1PQ6ZSU1 146 aa10.78□□□□□ -0.68
SNCA-205ENST00000394991 NPVFQ9HCQ7 196 aa10.78□□□□□ -0.68
SNCA-205ENST00000394991 HIGD1AQ9Y241 93 aa10.78□□□□□ -0.68
SNCA-205ENST00000394991 FAM24AA6NFZ4 105 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 SNURFLB1AK76 121 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 GOSR2O14653 212 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 MRPS12O15235 138 aaKnown RBP10.77□□□□□ -0.69
SNCA-205ENST00000394991 NXPH4O95158 308 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 SIX6O95475 246 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 IFNA5P01569 189 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 RAB32Q13637 225 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 CCDC28AQ8IWP9 274 aa10.77□□□□□ -0.69
SNCA-205ENST00000394991 J3QL48 77 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 PRAF2O60831 178 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 CST7O76096 145 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 RAP2BP61225 183 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 SLC38A11Q08AI6 406 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 TEPPQ6URK8 271 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 Q6ZSN1 163 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 LRRC20Q8TCA0 184 aa10.76□□□□□ -0.69
SNCA-205ENST00000394991 PRAC2D3DTV9 90 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 FNDC10F2Z333 226 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 HYPMO75409 117 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 OR5G3P0C626 314 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 LINC00869P0C866 280 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 PLP1P60201 277 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 DAZ2Q13117 558 aaKnown RBP10.75□□□□□ -0.69
SNCA-205ENST00000394991 GGACTQ9BVM4 153 aa10.75□□□□□ -0.69
SNCA-205ENST00000394991 J3KRW8 73 aa10.74□□□□□ -0.69
SNCA-205ENST00000394991 SNRPCP09234 159 aaKnown RBP10.74□□□□□ -0.69
SNCA-205ENST00000394991 GCSHP23434 173 aa10.74□□□□□ -0.69
SNCA-205ENST00000394991 SELENOTP62341 195 aa10.74□□□□□ -0.69
SNCA-205ENST00000394991 IL15RAQ13261 267 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms