RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TMEM86BQ8N661 226 aa13.9□□□□□ -0.18
SIN3A-203ENST00000394949 KLF5Q13887 457 aaPredicted RBP13.89□□□□□ -0.19
SIN3A-203ENST00000394949 PHF3Q92576 2039 aaKnown RBP13.89□□□□□ -0.19
SIN3A-203ENST00000394949 TRAV41A0A0B4J266 112 aa13.89□□□□□ -0.19
SIN3A-203ENST00000394949 MED13LQ71F56 2210 aa13.89□□□□□ -0.19
SIN3A-203ENST00000394949 ZNF876PQ49A33 203 aa13.89□□□□□ -0.19
SIN3A-203ENST00000394949 ETDBQ3ZM63 59 aa13.89□□□□□ -0.19
SIN3A-203ENST00000394949 Q8NFD4 153 aa13.89□□□□□ -0.19
SIN3A-203ENST00000394949 LSM4Q9Y4Z0 139 aaKnown RBP13.89□□□□□ -0.19
SIN3A-203ENST00000394949 TMEM213A2RRL7 107 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 TMEM14CQ9P0S9 112 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 PLXNA4Q9HCM2 1894 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 A0A1W2PRX2 142 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 RSPO1Q2MKA7 263 aaPredicted RBP13.88□□□□□ -0.19
SIN3A-203ENST00000394949 STHQ8IWL8 128 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 DPH3Q96FX2 82 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 DOCK11Q5JSL3 2073 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 TRBV19A0A075B6N1 114 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 VWC2Q2TAL6 325 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 ZNF407Q9C0G0 2248 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
SIN3A-203ENST00000394949 RASL10AQ92737 203 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 RCHY1Q96PM5 261 aa13.88□□□□□ -0.19
SIN3A-203ENST00000394949 A0A0G2JNJ9 132 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 B4DSR2 109 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 M0R1W7 72 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 ATP6V0BQ99437 205 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 Q9UFV3 132 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 MYMXA0A1B0GTQ4 84 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 SRRM4A7MD48 611 aaKnown RBP13.87□□□□□ -0.19
SIN3A-203ENST00000394949 CRPP02741 224 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 PRR20EP86478 221 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 PRR20CP86479 221 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 PRR20DP86480 221 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 PRR20BP86481 221 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 PRR20AP86496 221 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 DEFB125Q8N687 156 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 ZNF524Q96C55 264 aa13.87□□□□□ -0.19
SIN3A-203ENST00000394949 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
SIN3A-203ENST00000394949 VMO1Q7Z5L0 202 aa13.86□□□□□ -0.19
SIN3A-203ENST00000394949 OR11H6Q8NGC7 330 aa13.86□□□□□ -0.19
SIN3A-203ENST00000394949 NDUFB8O95169 186 aa13.86□□□□□ -0.19
SIN3A-203ENST00000394949 IGHV2-70DA0A0C4DH43 119 aa13.86□□□□□ -0.19
SIN3A-203ENST00000394949 MRPL51Q4U2R6 128 aaKnown RBP13.86□□□□□ -0.19
SIN3A-203ENST00000394949 TMEM141Q96I45 108 aa13.85□□□□□ -0.19
SIN3A-203ENST00000394949 TIMM21Q9BVV7 248 aa13.85□□□□□ -0.19
SIN3A-203ENST00000394949 CMC4P56277 68 aaPredicted RBP13.85□□□□□ -0.19
SIN3A-203ENST00000394949 LY6G5BQ8NDX9 201 aa13.85□□□□□ -0.19
SIN3A-203ENST00000394949 RNF166Q96A37 237 aaPredicted RBP13.85□□□□□ -0.19
SIN3A-203ENST00000394949 SPAG8Q99932 426 aaPredicted RBP13.85□□□□□ -0.19
SIN3A-203ENST00000394949 ADARB2-AS1A8MUL3 147 aa13.85□□□□□ -0.19
SIN3A-203ENST00000394949 PRB4P10163 310 aaPredicted RBP13.85□□□□□ -0.19
SIN3A-203ENST00000394949 K7EN84 100 aa13.84□□□□□ -0.19
SIN3A-203ENST00000394949 BOD1L2Q8IYS8 172 aa13.84□□□□□ -0.19
SIN3A-203ENST00000394949 SIGLEC8Q9NYZ4 499 aa13.84□□□□□ -0.19
SIN3A-203ENST00000394949 WDR81Q562E7 1941 aa13.84□□□□□ -0.19
SIN3A-203ENST00000394949 BDP1A6H8Y1 2624 aa13.84□□□□□ -0.19
SIN3A-203ENST00000394949 ZNF833PQ6ZTB9 187 aa13.84□□□□□ -0.19
SIN3A-203ENST00000394949 WISP1O95388 367 aa13.84□□□□□ -0.19
SIN3A-203ENST00000394949 POU2AF1Q16633 256 aa13.83□□□□□ -0.19
SIN3A-203ENST00000394949 ZNF474Q6S9Z5 364 aaPredicted RBP13.83□□□□□ -0.19
SIN3A-203ENST00000394949 C2orf66Q6UXQ4 117 aa13.83□□□□□ -0.19
SIN3A-203ENST00000394949 HEATR5AQ86XA9 2040 aa13.83□□□□□ -0.2
SIN3A-203ENST00000394949 CEND1Q8N111 149 aa13.83□□□□□ -0.2
SIN3A-203ENST00000394949 SHANK1Q9Y566 2161 aa13.83□□□□□ -0.2
SIN3A-203ENST00000394949 TCF20Q9UGU0 1960 aaKnown RBP13.83□□□□□ -0.2
SIN3A-203ENST00000394949 H3BMM0 161 aa13.83□□□□□ -0.2
SIN3A-203ENST00000394949 GATA4P43694 442 aa13.83□□□□□ -0.2
SIN3A-203ENST00000394949 UBE2WQ96B02 151 aa13.83□□□□□ -0.2
SIN3A-203ENST00000394949 LINC00158P58513 81 aa13.83□□□□□ -0.2
SIN3A-203ENST00000394949 A0A0U1RRA0 63 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 UNQ6494/PRO21346Q6UXR6 183 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 THAP8Q8NA92 274 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 PLA2G2EQ9NZK7 142 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 HTN3P15516 51 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 LYPD6Q86Y78 171 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 VGLL1Q99990 258 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 MSRB2Q9Y3D2 182 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 TRAV8-3A0A0A6YYJ7 113 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 C15orf65H3BRN8 121 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 CCL25O15444 150 aa13.82□□□□□ -0.2
SIN3A-203ENST00000394949 FXYD5Q96DB9 178 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 USMG5Q96IX5 58 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 FAM223BA6NKX1 122 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 GNLYP22749 145 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 FAM223AQ8IWN6 122 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 Q8TCH9 128 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 SSC4DQ8WTU2 575 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 ZNF747Q9BV97 191 aa13.81□□□□□ -0.2
SIN3A-203ENST00000394949 SLC25A16P16260 332 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 MALP21145 153 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 PMVKQ15126 192 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 WDR86Q86TI4 376 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 PRR25Q96S07 402 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 INAFM2P0DMQ5 153 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 LINC00311Q8N616 119 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 F8VRH5 84 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 AZU1P20160 251 aa13.8□□□□□ -0.2
SIN3A-203ENST00000394949 C8orf49Q96NF6 230 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms