RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 PFDN5Q99471 154 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 UQCC1Q9NVA1 299 aa12.08□□□□□ -0.48
HMGN1-204ENST00000380749 APOBP04114 4563 aaKnown RBP12.08□□□□□ -0.48
HMGN1-204ENST00000380749 C5orf51A6NDU8 294 aa12.07□□□□□ -0.48
HMGN1-204ENST00000380749 GUK1Q16774 197 aa12.07□□□□□ -0.48
HMGN1-204ENST00000380749 MORN5Q5VZ52 161 aa12.07□□□□□ -0.48
HMGN1-204ENST00000380749 NRARPQ7Z6K4 114 aa12.07□□□□□ -0.48
HMGN1-204ENST00000380749 PARD6GQ9BYG4 376 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-204ENST00000380749 DNAJC4Q9NNZ3 241 aa12.07□□□□□ -0.48
HMGN1-204ENST00000380749 DNAH5Q8TE73 4624 aa12.07□□□□□ -0.48
HMGN1-204ENST00000380749 TRAV6A0A075B6T7 132 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 SNURFLB1AK76 121 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 CST7O76096 145 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 TCRBP04435 133 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 LEPP41159 167 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 ZNF575Q86XF7 245 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 ZNF431Q8TF32 576 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-204ENST00000380749 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 NUDT15Q9NV35 164 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 WDR83OSQ9Y284 106 aa12.06□□□□□ -0.48
HMGN1-204ENST00000380749 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 PRAC2D3DTV9 90 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 H3BQ15 152 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 PLA2G10O15496 165 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 BAXQ07812 192 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 KIR3DS1Q14943 382 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 MIC13Q5XKP0 118 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 STX12Q86Y82 276 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 J3KRW8 73 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 RLN2P04090 185 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 S100A10P60903 97 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 HBG1P69891 147 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 HBG2P69892 147 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 OR5I1Q13606 314 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 C12orf45Q8N5I9 185 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-204ENST00000380749 GNPNAT1Q96EK6 184 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-204ENST00000380749 SAT2Q96F10 170 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-204ENST00000380749 C2orf50Q96LR7 162 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 SEC22CQ9BRL7 303 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 LYRM2Q9NU23 88 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-204ENST00000380749 LINC00588Q9Y4M8 146 aa12.05□□□□□ -0.48
HMGN1-204ENST00000380749 FAM24AA6NFZ4 105 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 NPIPB6E9PJ23 425 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 ZNF253O75346 499 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 M6PRP20645 277 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 SULT1A1P50225 295 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 VWC2Q2TAL6 325 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 SSX7Q7RTT5 188 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 LINC00612Q8N6U2 182 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 SLC39A9Q9NUM3 307 aa12.04□□□□□ -0.48
HMGN1-204ENST00000380749 TRAV26-1A0A087WT03 109 aa12.03□□□□□ -0.48
HMGN1-204ENST00000380749 S100A11P31949 105 aa12.03□□□□□ -0.48
HMGN1-204ENST00000380749 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
HMGN1-204ENST00000380749 TNP2Q05952 138 aa12.03□□□□□ -0.48
HMGN1-204ENST00000380749 MRPL53Q96EL3 112 aaKnown RBP12.03□□□□□ -0.48
HMGN1-204ENST00000380749 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
HMGN1-204ENST00000380749 PYGO2Q9BRQ0 406 aa12.03□□□□□ -0.48
HMGN1-204ENST00000380749 C11orf1Q9H5F2 150 aa12.03□□□□□ -0.48
HMGN1-204ENST00000380749 TRAV5A0A0B4J249 113 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 TRAV12-3A0A0B4J271 114 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 GAGE12BA1L429 117 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 GAGE7O76087 117 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 GAGE12FP0CL80 117 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 GAGE12GP0CL81 117 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 GAGE12IP0CL82 117 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 CT45A10P0DMU9 189 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 TTC32Q5I0X7 151 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 RXFP4Q8TDU9 374 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
HMGN1-204ENST00000380749 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
HMGN1-204ENST00000380749 H2AFB2P0C5Z0 115 aa12.01□□□□□ -0.49
HMGN1-204ENST00000380749 FGF7P21781 194 aa12.01□□□□□ -0.49
HMGN1-204ENST00000380749 CCDC32Q9BV29 185 aa12.01□□□□□ -0.49
HMGN1-204ENST00000380749 A0A0J9YY99 117 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 IGSF23A1L1A6 192 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 MPDU1O75352 247 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 SLC25A5P05141 298 aaKnown RBP12□□□□□ -0.49
HMGN1-204ENST00000380749 RAB32Q13637 225 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 PDE6HQ13956 83 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 ATP6V1FQ16864 119 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 TMEM252Q8N6L7 170 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 ZNF680Q8NEM1 530 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 GPN1Q9HCN4 374 aaPredicted RBP12□□□□□ -0.49
HMGN1-204ENST00000380749 NDUFA13Q9P0J0 144 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 TMEM14CQ9P0S9 112 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 PRELID1Q9Y255 219 aa12□□□□□ -0.49
HMGN1-204ENST00000380749 TRBV19A0A075B6N1 114 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 FAM240BA0A1B0GVZ2 78 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 C7orf71A4D174 169 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 H3BNG1 76 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 M0R3E3 92 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 HIST1H1EP10412 219 aaKnown RBP11.99□□□□□ -0.49
HMGN1-204ENST00000380749 HOXA5P20719 270 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
HMGN1-204ENST00000380749 CHAC2Q8WUX2 184 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 Q9H8V8 135 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 TIMM9Q9Y5J7 89 aa11.99□□□□□ -0.49
HMGN1-204ENST00000380749 TMPRSS5Q9H3S3 457 aa11.98□□□□□ -0.49
HMGN1-204ENST00000380749 AAMDCQ9H7C9 122 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms