RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 HOXA5P20719 270 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 TNP2Q05952 138 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 C10orf113Q5VZT2 155 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 IGF2BP2-AS1Q96M15 143 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 ATG101Q9BSB4 218 aa3.28□□□□□ -1.88
C9orf72-203ENST00000380003 DUXBA0A1W2PPF3 345 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 INSP01308 110 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 FABP1P07148 127 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 H2AFB2P0C5Z0 115 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 CT45A10P0DMU9 189 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 SLC25A6P12236 298 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 RPL7P18124 248 aaKnown RBP3.27□□□□□ -1.89
C9orf72-203ENST00000380003 B2MP61769 119 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 BTN1A1Q13410 526 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 PSG3Q16557 428 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 MUC21Q5SSG8 566 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 Q6ZTI0 123 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 C12orf45Q8N5I9 185 aaPredicted RBP3.27□□□□□ -1.89
C9orf72-203ENST00000380003 LINC00477Q96M19 166 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 KRTAP1-5Q9BYS1 174 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 ZNF331Q9NQX6 463 aaPredicted RBP3.27□□□□□ -1.89
C9orf72-203ENST00000380003 GSN-AS1Q9NRJ2 163 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 PFDN2Q9UHV9 154 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 SLC45A2Q9UMX9 530 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 RPH3ALQ9UNE2 315 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 H0YIZ8 118 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 FGF7P21781 194 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 RNASE4P34096 147 aaKnown RBP3.27□□□□□ -1.89
C9orf72-203ENST00000380003 CDKN1BP46527 198 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 H2BFSP57053 126 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 PRR9Q5T870 116 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 Q6ZRG5 221 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 MIR17HGQ75NE6 70 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 TMEM252Q8N6L7 170 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 OR5C1Q8NGR4 320 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 ZNF431Q8TF32 576 aaPredicted RBP3.27□□□□□ -1.89
C9orf72-203ENST00000380003 VGLL1Q99990 258 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 RNF126Q9BV68 326 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 GPN1Q9HCN4 374 aaPredicted RBP3.27□□□□□ -1.89
C9orf72-203ENST00000380003 PGPEP1Q9NXJ5 209 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 BOLA2-SMG1P6H3BVE0 249 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 P0DMU3 169 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 FAM231AP0DMU4 169 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 FAM231CP0DMU5 169 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 HAMPP81172 84 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 CNPY1Q3B7I2 92 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 SSX7Q7RTT5 188 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 TMPRSS5Q9H3S3 457 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 DNAJC4Q9NNZ3 241 aa3.27□□□□□ -1.89
C9orf72-203ENST00000380003 RABL2AQ9UBK7 228 aaPredicted RBP3.27□□□□□ -1.89
C9orf72-203ENST00000380003 NAP1L6A6NFF2 107 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 AMBPP02760 352 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 SFTA3P0C7M3 94 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 IGLC2P0DOY2 106 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 RANP62826 216 aaKnown RBP3.26□□□□□ -1.89
C9orf72-203ENST00000380003 ICAM4Q14773 271 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 BPIFA4PQ86YQ2 179 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 RNF141Q8WVD5 230 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 SAT2Q96F10 170 aaPredicted RBP3.26□□□□□ -1.89
C9orf72-203ENST00000380003 UQCC1Q9NVA1 299 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 LINC00588Q9Y4M8 146 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 PXMP4Q9Y6I8 212 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 NDUFB4O95168 129 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 RNASE8Q8TDE3 154 aaKnown RBP3.26□□□□□ -1.89
C9orf72-203ENST00000380003 SLC39A9Q9NUM3 307 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 KLF12Q9Y4X4 402 aa3.26□□□□□ -1.89
C9orf72-203ENST00000380003 TRGV1A0A0A0MS02 117 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 TRAV8-1A0A0A6YYK1 113 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 A0A1B0GVY2 172 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 E5RGE8 158 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 MEOX2P50222 304 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 TMEM41BQ5BJD5 291 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 ENKURQ8TC29 256 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 C2orf50Q96LR7 162 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 NPCDR1Q9BY65 106 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 AGPAT4-IT1Q9H0P7 198 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 LYRM2Q9NU23 88 aaPredicted RBP3.25□□□□□ -1.89
C9orf72-203ENST00000380003 MRPL16Q9NX20 251 aaKnown RBP3.25□□□□□ -1.89
C9orf72-203ENST00000380003 CACFD1Q9UGQ2 172 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 TIMM8BQ9Y5J9 83 aaPredicted RBP3.25□□□□□ -1.89
C9orf72-203ENST00000380003 TRGV2A0A075B6R0 118 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 CBY3A6NI87 242 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 ZNF701M0R085 212 aaPredicted RBP3.25□□□□□ -1.89
C9orf72-203ENST00000380003 SULT1A1P50225 295 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 ATP5IP56385 69 aaPredicted RBP3.25□□□□□ -1.89
C9orf72-203ENST00000380003 DEFA3P59666 94 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 SELENOTP62341 195 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 ESRGQ1W209 222 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 ZNF546Q86UE3 836 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 OR10J6PQ8NGY7 276 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 PPP1R1CQ8WVI7 109 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 PHYHIPLQ96FC7 376 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 NEU1Q99519 415 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 C11orf1Q9H5F2 150 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 NAGKQ9UJ70 344 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 FLG2Q5D862 2391 aaPredicted RBP3.25□□□□□ -1.89
C9orf72-203ENST00000380003 SMIM9A6NGZ8 99 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 OR7C2O60412 319 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 ATP5G1P05496 136 aa3.25□□□□□ -1.89
C9orf72-203ENST00000380003 NUP62P37198 522 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms