RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 SMRP1Q8NCR6 262 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 ZNF503-AS2A6NEH8 195 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 ZNF56Q15929 161 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 HCFC1P51610 2035 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 IGLV3-12A0A075B6K2 115 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 PRSS2P07478 247 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 OR11H6Q8NGC7 330 aa8.78□□□□□ -1
USP6NL-202ENST00000379237 THSD7BQ9C0I4 1608 aa8.77□□□□□ -1
USP6NL-202ENST00000379237 PRSS46E5RG02 174 aa8.77□□□□□ -1
USP6NL-202ENST00000379237 SLC25A20O43772 301 aa8.77□□□□□ -1
USP6NL-202ENST00000379237 PF4V1P10720 104 aa8.77□□□□□ -1
USP6NL-202ENST00000379237 RPL27AP46776 148 aaKnown RBP8.77□□□□□ -1
USP6NL-202ENST00000379237 NXPH1P58417 271 aa8.77□□□□□ -1
USP6NL-202ENST00000379237 FAM201AQ5SY85 155 aa8.77□□□□□ -1
USP6NL-202ENST00000379237 ANKRD29Q8N6D5 301 aa8.77□□□□□ -1
USP6NL-202ENST00000379237 PCNX2A6NKB5 2137 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 PLNP26678 52 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 MNX1P50219 401 aaPredicted RBP8.77□□□□□ -1.01
USP6NL-202ENST00000379237 TM2D2Q9BX73 214 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 ZNF785A8K8V0 405 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 MRPL23Q16540 153 aaKnown RBP8.77□□□□□ -1.01
USP6NL-202ENST00000379237 TMEM170BQ5T4T1 132 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 DDB2Q92466 427 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 NTN5Q8WTR8 489 aaPredicted RBP8.77□□□□□ -1.01
USP6NL-202ENST00000379237 HES7Q9BYE0 225 aa8.77□□□□□ -1.01
USP6NL-202ENST00000379237 CADP27708 2225 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 COX6CP09669 75 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 ZNF134P52741 427 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 DEFB109BQ30KR1 87 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 CCL13Q99616 98 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 COL6A6A6NMZ7 2263 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 TNFRSF6BO95407 300 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 MGPP08493 103 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 MRPL20Q9BYC9 149 aaKnown RBP8.76□□□□□ -1.01
USP6NL-202ENST00000379237 CD177Q8N6Q3 437 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 OR4C13Q8NGP0 309 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 AGRNO00468 2067 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 CFAP54Q96N23 3096 aa8.76□□□□□ -1.01
USP6NL-202ENST00000379237 COX6A1P12074 109 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 ZFP2Q6ZN57 461 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 C8orf46Q8TAG6 207 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 RPUSD1Q9UJJ7 312 aaKnown RBP8.75□□□□□ -1.01
USP6NL-202ENST00000379237 CPAMD8Q8IZJ3 1885 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 LGALS3P17931 250 aaKnown RBP8.75□□□□□ -1.01
USP6NL-202ENST00000379237 LAGE3Q14657 143 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 ODF1Q14990 250 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 PATE2Q6UY27 113 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 PRSS22Q9GZN4 317 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 IGHV5-10-1A0A0J9YXX1 117 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 C5orf67F2Z3F1 127 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 M0QXV9 152 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 LINC00312Q9Y6C7 94 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 C19orf71A6NCJ1 209 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 H7C1H1 209 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 SH2D1AO60880 128 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 SRSF1Q07955 248 aaKnown RBP eCLIP8.75□□□□□ -1.01
USP6NL-202ENST00000379237 LINC01559Q495D7 138 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 C1orf159Q96HA4 380 aa8.75□□□□□ -1.01
USP6NL-202ENST00000379237 IQCF6A8MYZ5 107 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 KRTAP27-1Q3LI81 207 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 C8orf49Q96NF6 230 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 CCL4P13236 92 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 SLC25A39Q9BZJ4 359 aaPredicted RBP8.74□□□□□ -1.01
USP6NL-202ENST00000379237 CDIP1Q9H305 208 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 CHD7Q9P2D1 2997 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 CGB1A6NKQ9 187 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 C1orf210Q8IVY1 113 aa8.74□□□□□ -1.01
USP6NL-202ENST00000379237 SLC25A16P16260 332 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 ASIPP42127 132 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 EFNA4P52798 201 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 KLRB1Q12918 225 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 SLC25A45Q8N413 288 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 ZNRD1Q9P1U0 126 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 TRIOO75962 3097 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 GLRXP35754 106 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 S4R3C0 116 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 EML6Q6ZMW3 1958 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 M0R1B8 84 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 PATE3B3GLJ2 98 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 ATP5J2P56134 94 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 B3GALT5-AS1P59052 145 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 Q8TAT8 98 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 PRADC1Q9BSG0 188 aa8.73□□□□□ -1.01
USP6NL-202ENST00000379237 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-202ENST00000379237 C15orf65H3BRN8 121 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 PROP1O75360 226 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-202ENST00000379237 CRYGCP07315 174 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 MAPKAPK5-AS1Q8N8E1 139 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 DEFB124Q8NES8 71 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 PRR7Q8TB68 274 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 TMEM133Q9H2Q1 129 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
USP6NL-202ENST00000379237 SRRM4A7MD48 611 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms