RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 FLYWCH2Q96CP2 140 aaKnown RBP13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 CSMD2Q7Z408 3487 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 TRAV8-1A0A0A6YYK1 113 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 NMUP48645 174 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 BCL6BQ8N143 479 aaPredicted RBP13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 NPIPB3Q92617 1050 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 RNASE6Q93091 150 aaKnown RBP13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 RNF183Q96D59 192 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 LINC00312Q9Y6C7 94 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 NDUFB3O43676 98 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 RNASE2P10153 161 aaKnown RBP13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 KIR2DS2P43631 304 aa13.74□□□□□ -0.21
LDLRAP1-201ENST00000374338 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 C20orf78Q9BR46 151 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 PAXXQ9BUH6 204 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 CGB1A6NKQ9 187 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 H3BMG7 143 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 TEX36Q5VZQ5 186 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 PRSS22Q9GZN4 317 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 PRNDQ9UKY0 176 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 ITPR1Q14643 2758 aa13.73□□□□□ -0.21
LDLRAP1-201ENST00000374338 K7EMI3 77 aa13.72□□□□□ -0.21
LDLRAP1-201ENST00000374338 SLC25A5P05141 298 aaKnown RBP13.72□□□□□ -0.21
LDLRAP1-201ENST00000374338 IGF2-ASQ6U949 168 aa13.72□□□□□ -0.21
LDLRAP1-201ENST00000374338 LGALS9BQ3B8N2 356 aa13.72□□□□□ -0.21
LDLRAP1-201ENST00000374338 LGALS9CQ6DKI2 356 aa13.72□□□□□ -0.21
LDLRAP1-201ENST00000374338 RBPMS2Q6ZRY4 209 aaKnown RBP13.72□□□□□ -0.21
LDLRAP1-201ENST00000374338 S4R3C0 116 aa13.72□□□□□ -0.21
LDLRAP1-201ENST00000374338 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 SHISA9B4DS77 424 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 SPINK8P0C7L1 97 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 ORM2P19652 201 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 LOXP28300 417 aaPredicted RBP13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 PATE2Q6UY27 113 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 UTP20O75691 2785 aaKnown RBP13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 HIVEP3Q5T1R4 2406 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 E9PLD3 99 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 CACNG7P62955 275 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 NUP37Q8NFH4 326 aa13.71□□□□□ -0.21
LDLRAP1-201ENST00000374338 A0A096LNJ9 63 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 PGPA6NDG6 321 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 COX7A2P2O60397 106 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 LOXL1Q08397 574 aaPredicted RBP13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 TTC9CQ8N5M4 171 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 TPPP3Q9BW30 176 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 P01737 135 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 ZNF833PQ6ZTB9 187 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 WFDC3Q8IUB2 231 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 PRSS3P2Q8NHM4 247 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 CDIP1Q9H305 208 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 ERG28Q9UKR5 140 aa13.7□□□□□ -0.22
LDLRAP1-201ENST00000374338 LOC389332A0A1B0GUA5 103 aa13.69□□□□□ -0.22
LDLRAP1-201ENST00000374338 CT83Q5H943 113 aa13.69□□□□□ -0.22
LDLRAP1-201ENST00000374338 MLST8Q9BVC4 326 aa13.69□□□□□ -0.22
LDLRAP1-201ENST00000374338 NHP2Q9NX24 153 aaKnown RBP13.69□□□□□ -0.22
LDLRAP1-201ENST00000374338 CELSR2Q9HCU4 2923 aa13.69□□□□□ -0.22
LDLRAP1-201ENST00000374338 CYSLTR1Q9Y271 337 aa13.69□□□□□ -0.22
LDLRAP1-201ENST00000374338 CENPEQ02224 2701 aa13.69□□□□□ -0.22
LDLRAP1-201ENST00000374338 TCRBV4S1A1TA0A5B7 111 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 MT-ATP8P03928 68 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 CD69Q07108 199 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 AMTNQ6UX39 209 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 CIARTQ8N365 385 aaPredicted RBP13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 GPR82Q96P67 336 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 NDUFA4L2Q9NRX3 87 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 A0A1W2PPI3 338 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 FXYD5Q96DB9 178 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 MRPL32Q9BYC8 188 aaKnown RBP13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 PRO0461Q9UI25 63 aa13.68□□□□□ -0.22
LDLRAP1-201ENST00000374338 C19orf71A6NCJ1 209 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 IGLL5B9A064 214 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 LTAP01374 205 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 GAGE13Q4V321 117 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 TTTY13Q9BZ97 58 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 HAX1O00165 279 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 LINC00305Q7Z4B0 112 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 SYT8Q8NBV8 401 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 OR5AN1Q8NGI8 311 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 GFRA4Q9GZZ7 299 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 ZNF502Q8TBZ5 544 aa13.67□□□□□ -0.22
LDLRAP1-201ENST00000374338 NPIPB6E9PJ23 425 aa13.66□□□□□ -0.22
LDLRAP1-201ENST00000374338 IFI27P40305 119 aaPredicted RBP13.66□□□□□ -0.22
LDLRAP1-201ENST00000374338 OR4C13Q8NGP0 309 aa13.66□□□□□ -0.22
LDLRAP1-201ENST00000374338 EPDR1Q9UM22 224 aa13.66□□□□□ -0.22
LDLRAP1-201ENST00000374338 IGLV2-23P01705 113 aa13.66□□□□□ -0.22
LDLRAP1-201ENST00000374338 IGHV1-8P0DP01 117 aa13.66□□□□□ -0.22
LDLRAP1-201ENST00000374338 RAB9BQ9NP90 201 aa13.66□□□□□ -0.22
LDLRAP1-201ENST00000374338 HERV-K104P63124 156 aa13.65□□□□□ -0.22
LDLRAP1-201ENST00000374338 KLF12Q9Y4X4 402 aa13.65□□□□□ -0.22
LDLRAP1-201ENST00000374338 CUBNO60494 3623 aa13.65□□□□□ -0.22
LDLRAP1-201ENST00000374338 ZNF414Q96IQ9 312 aa13.65□□□□□ -0.22
LDLRAP1-201ENST00000374338 CHAC1Q9BUX1 264 aa13.65□□□□□ -0.22
LDLRAP1-201ENST00000374338 FBXL15Q9H469 300 aa13.65□□□□□ -0.22
LDLRAP1-201ENST00000374338 HIGD1BQ9P298 99 aa13.65□□□□□ -0.22
LDLRAP1-201ENST00000374338 MYCNOSP40205 109 aa13.64□□□□□ -0.23
LDLRAP1-201ENST00000374338 POU2AF1Q16633 256 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms