RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 C2orf66Q6UXQ4 117 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 IGHV3-38A0A0C4DH36 116 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 PLXNA1Q9UIW2 1896 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 APC2O95996 2303 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 HLA-DRB4P13762 266 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 HLA-DRB4X5D2U9 266 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 ASXL3Q9C0F0 2248 aa12.6□□□□□ -0.39
NUCKS1-201ENST00000367142 A0A096LPF7 62 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 BRCA1P38398 1863 aaKnown RBP12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 TRAV12-2A0A075B6T6 113 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 UBL5Q9BZL1 73 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 C3orf79P0CE67 100 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 TMEM256Q8N2U0 113 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 IGKV1OR2-108A0A075B7D4 117 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 IGHV1-24A0A0C4DH33 117 aa12.59□□□□□ -0.39
NUCKS1-201ENST00000367142 C5orf24Q7Z6I8 188 aa12.58□□□□□ -0.39
NUCKS1-201ENST00000367142 DSCR8Q96T75 97 aa12.58□□□□□ -0.39
NUCKS1-201ENST00000367142 CITED2Q99967 270 aaPredicted RBP12.58□□□□□ -0.39
NUCKS1-201ENST00000367142 NDUFS5O43920 106 aa12.58□□□□□ -0.4
NUCKS1-201ENST00000367142 OTOFQ9HC10 1997 aa12.58□□□□□ -0.4
NUCKS1-201ENST00000367142 NDUFA4L2Q9NRX3 87 aa12.58□□□□□ -0.4
NUCKS1-201ENST00000367142 TMEM213A2RRL7 107 aa12.58□□□□□ -0.4
NUCKS1-201ENST00000367142 SDHAF1A6NFY7 115 aa12.58□□□□□ -0.4
NUCKS1-201ENST00000367142 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.4
NUCKS1-201ENST00000367142 PIKFYVEQ9Y2I7 2098 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 IGHV7-4-1A0A0J9YVY3 117 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 RHOHQ15669 191 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 ZNRD1Q9P1U0 126 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 H3BUA1 57 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 SRSF2Q01130 221 aaKnown RBP12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 NCOR1P1Q9H4R4 102 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 HERVK_113P63121 156 aa12.57□□□□□ -0.4
NUCKS1-201ENST00000367142 ZNF134P52741 427 aa12.56□□□□□ -0.4
NUCKS1-201ENST00000367142 C9orf66Q5T8R8 295 aa12.56□□□□□ -0.4
NUCKS1-201ENST00000367142 FAM231BA6NCW3 169 aa12.56□□□□□ -0.4
NUCKS1-201ENST00000367142 TCF15Q12870 199 aa12.56□□□□□ -0.4
NUCKS1-201ENST00000367142 TMEM14BQ9NUH8 114 aa12.56□□□□□ -0.4
NUCKS1-201ENST00000367142 CKAP5Q14008 2032 aa12.56□□□□□ -0.4
NUCKS1-201ENST00000367142 IGKV1-39P01597 117 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 IGKV1D-39P04432 117 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 QRFPP83859 136 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 H3BRN7 92 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 FAM104BQ5XKR9 115 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 LOXP28300 417 aaPredicted RBP12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 HAMPP81172 84 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 PTPRFP10586 1907 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 TRAV13-2A0A0B4J235 113 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 RALGAPA2Q2PPJ7 1873 aa12.55□□□□□ -0.4
NUCKS1-201ENST00000367142 VPREB3Q9UKI3 123 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 SVILO95425 2214 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 TEX36Q5VZQ5 186 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 A0A0G2JMZ2 1700 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 LRRC37A2A6NM11 1700 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 FOXI2Q6ZQN5 318 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 BRWD3Q6RI45 1802 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 A0A0G2JRQ6 117 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 MPV17L2Q567V2 206 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 ATP6V0BQ99437 205 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 A0A0J9YY99 117 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 CFPP27918 469 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 CLPSL2Q6UWE3 100 aa12.54□□□□□ -0.4
NUCKS1-201ENST00000367142 UTF1Q5T230 341 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 LINC00479Q96M42 142 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 ZNF581Q9P0T4 197 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 NDUFA12Q9UI09 145 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 LMO1P25800 156 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 ICE1Q9Y2F5 2266 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 DOCK4Q8N1I0 1966 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 hADV29S1A0JD25 119 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 KLHDC3Q9BQ90 382 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 TMEM14CQ9P0S9 112 aa12.53□□□□□ -0.4
NUCKS1-201ENST00000367142 COLCA2A8K830 154 aa12.52□□□□□ -0.4
NUCKS1-201ENST00000367142 FAM120AOSQ5T036 256 aa12.52□□□□□ -0.4
NUCKS1-201ENST00000367142 A0A1B0GUS0 222 aa12.52□□□□□ -0.41
NUCKS1-201ENST00000367142 OR11H6Q8NGC7 330 aa12.52□□□□□ -0.41
NUCKS1-201ENST00000367142 C1orf43Q9BWL3 253 aa12.52□□□□□ -0.41
NUCKS1-201ENST00000367142 CCL24O00175 119 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 C17orf58Q2M2W7 97 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 Q9HAA7 133 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 NOP10Q9NPE3 64 aaKnown RBP12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 RNF144BQ7Z419 303 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 MRPL53Q96EL3 112 aaKnown RBP12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 TRAV26-2A0A0B4J265 109 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 CCL18P55774 89 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 STPG4Q8N801 248 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 PRR25Q96S07 402 aa12.51□□□□□ -0.41
NUCKS1-201ENST00000367142 ARID2Q68CP9 1835 aa12.5□□□□□ -0.41
NUCKS1-201ENST00000367142 ADAMTSL5Q6ZMM2 481 aa12.5□□□□□ -0.41
NUCKS1-201ENST00000367142 TRBV20-1A0A075B6N2 111 aa12.5□□□□□ -0.41
NUCKS1-201ENST00000367142 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
NUCKS1-201ENST00000367142 Q6ZRM9 215 aa12.5□□□□□ -0.41
NUCKS1-201ENST00000367142 SCN2AQ99250 2005 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms