RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 TRAV17A0A0B4J275 112 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 H3BMM0 161 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 IGKV1-39P01597 117 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 TRACP01848 142 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 IGKV1D-39P04432 117 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 UBE2WQ96B02 151 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
PRKN-206ENST00000366898 TMEM213A2RRL7 107 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 MGST3O14880 152 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
PRKN-206ENST00000366898 ZNRF1Q8ND25 227 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 CALYQ9NYX4 217 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 ATXN8Q156A1 80 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 SPXQ9BT56 116 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 C2orf70A6NJV1 201 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 FOXC1Q12948 553 aa9.51□□□□□ -0.89
PRKN-206ENST00000366898 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 KIR2DL4Q99706 377 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 SPANXB1Q9NS25 103 aaPredicted RBP9.5□□□□□ -0.89
PRKN-206ENST00000366898 IGKV3D-15A0A087WSY6 115 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 DKK1O94907 266 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 IGKV3-15P01624 115 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 CD59P13987 128 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 SRSF1Q07955 248 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRKN-206ENST00000366898 CCL17Q92583 94 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 MRPL35Q9NZE8 188 aaKnown RBP9.5□□□□□ -0.89
PRKN-206ENST00000366898 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 J3KT08 172 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 INSL3P51460 131 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 FOXF2Q12947 444 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 MRAPQ8TCY5 172 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 KLF14Q8TD94 323 aaPredicted RBP9.5□□□□□ -0.89
PRKN-206ENST00000366898 ZNF71Q9NQZ8 489 aaPredicted RBP9.5□□□□□ -0.89
PRKN-206ENST00000366898 COL6A3P12111 3177 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 NAV3Q8IVL0 2385 aa9.5□□□□□ -0.89
PRKN-206ENST00000366898 NDUFB3O43676 98 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 FAM214BQ7L5A3 538 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 TEN1Q86WV5 123 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 SPRR3Q9UBC9 169 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 CEP192Q8TEP8 1941 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 LTAP01374 205 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 FGF6P10767 208 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 SLC25A16P16260 332 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 NDUFV3P56181 108 aaKnown RBP9.49□□□□□ -0.89
PRKN-206ENST00000366898 OTOGLQ3ZCN5 2332 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 FAM236AA0A1B0GUQ0 79 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 FAM236BA0A1B0GV22 79 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 C10orf142B7Z368 130 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 CD69Q07108 199 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
PRKN-206ENST00000366898 CCL13Q99616 98 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 NUP210LQ5VU65 1888 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 FAM201AQ5SY85 155 aa9.49□□□□□ -0.89
PRKN-206ENST00000366898 FAM53AQ6NSI3 398 aaPredicted RBP9.49□□□□□ -0.89
PRKN-206ENST00000366898 CEP295Q9C0D2 2601 aa9.48□□□□□ -0.89
PRKN-206ENST00000366898 LINC00473A8K010 186 aa9.48□□□□□ -0.89
PRKN-206ENST00000366898 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
PRKN-206ENST00000366898 TMEM126AQ9H061 195 aa9.48□□□□□ -0.89
PRKN-206ENST00000366898 CCDC179H3BU77 68 aa9.48□□□□□ -0.89
PRKN-206ENST00000366898 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
PRKN-206ENST00000366898 JPT1Q9UK76 154 aa9.48□□□□□ -0.89
PRKN-206ENST00000366898 IGHV3-49A0A0A0MS15 119 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 M0R2P5 195 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 IGHV1-2P23083 117 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 DUTP33316 252 aaKnown RBP9.47□□□□□ -0.89
PRKN-206ENST00000366898 ZNF625Q96I27 306 aaPredicted RBP9.47□□□□□ -0.89
PRKN-206ENST00000366898 C15orf61A6NNL5 157 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 LAGE3Q14657 143 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 TNCP24821 2201 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 MYMXA0A1B0GTQ4 84 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 NDUFS7O75251 213 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 TNFAIP6P98066 277 aaPredicted RBP9.47□□□□□ -0.89
PRKN-206ENST00000366898 C5orf64Q2M2E5 130 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
PRKN-206ENST00000366898 H7C1H1 209 aa9.46□□□□□ -0.89
PRKN-206ENST00000366898 PLNP26678 52 aa9.46□□□□□ -0.89
PRKN-206ENST00000366898 SRSF2Q01130 221 aaKnown RBP9.46□□□□□ -0.89
PRKN-206ENST00000366898 FOXL2NBQ6ZUU3 175 aa9.46□□□□□ -0.89
PRKN-206ENST00000366898 WDR31Q8NA23 367 aa9.46□□□□□ -0.89
PRKN-206ENST00000366898 PRSS33Q8NF86 280 aa9.46□□□□□ -0.89
PRKN-206ENST00000366898 RNF138Q8WVD3 245 aa9.46□□□□□ -0.89
PRKN-206ENST00000366898 TMEM42Q69YG0 159 aa9.46□□□□□ -0.89
PRKN-206ENST00000366898 KLF5Q13887 457 aaPredicted RBP9.46□□□□□ -0.9
PRKN-206ENST00000366898 RAB1BQ9H0U4 201 aa9.46□□□□□ -0.9
PRKN-206ENST00000366898 CDX4O14627 284 aaPredicted RBP9.45□□□□□ -0.9
PRKN-206ENST00000366898 NEGR1Q7Z3B1 354 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 ANKRD29Q8N6D5 301 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 ATG2AQ2TAZ0 1938 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 GATA3P23771 443 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 ZNF497Q6ZNH5 498 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 C11orf52Q96A22 123 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 CHCHD5Q9BSY4 110 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 TRAV21A0A0B4J279 112 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 PMS2P5A8MQ11 134 aa9.45□□□□□ -0.9
PRKN-206ENST00000366898 MALRD1Q5VYJ5 2156 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms