RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SLC25A16P16260 332 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 C9orf139Q6ZV77 190 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 KIAA1549LQ6ZVL6 1849 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 DUX4L9Q6RFH8 374 aaPredicted RBP11.17□□□□□ -0.62
SMC5-201ENST00000361138 VMO1Q7Z5L0 202 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 IL17RELQ6ZVW7 336 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 LINC01587Q99440 93 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 IGHG3P01860 377 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
SMC5-201ENST00000361138 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
SMC5-201ENST00000361138 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 H3BMM0 161 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 IGLV2-14P01704 120 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 LINC01545Q5VT33 79 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 COL4A4P53420 1690 aaPredicted RBP11.16□□□□□ -0.62
SMC5-201ENST00000361138 POU2AF1Q16633 256 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 SRRM4A7MD48 611 aaKnown RBP11.16□□□□□ -0.62
SMC5-201ENST00000361138 RNF138Q8WVD3 245 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 NDPQ00604 133 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 ODF3L1Q8IXM7 274 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 Q8TCH9 128 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
SMC5-201ENST00000361138 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
SMC5-201ENST00000361138 GATA4P43694 442 aa11.15□□□□□ -0.62
SMC5-201ENST00000361138 PRR25Q96S07 402 aa11.15□□□□□ -0.62
SMC5-201ENST00000361138 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.62
SMC5-201ENST00000361138 SRD5A1P18405 259 aa11.15□□□□□ -0.62
SMC5-201ENST00000361138 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
SMC5-201ENST00000361138 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
SMC5-201ENST00000361138 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
SMC5-201ENST00000361138 IGLC1P0CG04 106 aa11.15□□□□□ -0.62
SMC5-201ENST00000361138 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
SMC5-201ENST00000361138 TMEM141Q96I45 108 aa11.15□□□□□ -0.62
SMC5-201ENST00000361138 DOCK11Q5JSL3 2073 aa11.15□□□□□ -0.63
SMC5-201ENST00000361138 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.63
SMC5-201ENST00000361138 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.63
SMC5-201ENST00000361138 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.63
SMC5-201ENST00000361138 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.63
SMC5-201ENST00000361138 IFITM1P13164 125 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 TCF15Q12870 199 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 MORN3Q6PF18 240 aaPredicted RBP11.14□□□□□ -0.63
SMC5-201ENST00000361138 TPSG1Q9NRR2 321 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 FAM120AOSQ5T036 256 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 C2orf66Q6UXQ4 117 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 AMTNQ6UX39 209 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
SMC5-201ENST00000361138 THBDP07204 575 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 FRMD6-AS1P0C7T7 363 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 KMT2EQ8IZD2 1858 aa11.14□□□□□ -0.63
SMC5-201ENST00000361138 LY6G6EA0A0G2JKS1 128 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 K7EM74 188 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 TIMM21Q9BVV7 248 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 U3KQA8 63 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 A0A087WX48 190 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 ZNF672Q499Z4 452 aaPredicted RBP11.13□□□□□ -0.63
SMC5-201ENST00000361138 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 MINOS1Q5TGZ0 78 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 MINOS1-NBL1R4GNA1 71 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 TEX48A0A1B0GUV7 120 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 OOSP1A8MZH6 123 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
SMC5-201ENST00000361138 C1QTNF4Q9BXJ3 329 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 ABHD17AQ96GS6 310 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 CCL19Q99731 98 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 PRADC1Q9BSG0 188 aa11.13□□□□□ -0.63
SMC5-201ENST00000361138 EDA2RQ9HAV5 297 aa11.12□□□□□ -0.63
SMC5-201ENST00000361138 G3V4G9 280 aa11.12□□□□□ -0.63
SMC5-201ENST00000361138 M0R1W7 72 aa11.12□□□□□ -0.63
SMC5-201ENST00000361138 ABCA7Q8IZY2 2146 aa11.12□□□□□ -0.63
SMC5-201ENST00000361138 PMVKQ15126 192 aa11.12□□□□□ -0.63
SMC5-201ENST00000361138 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
SMC5-201ENST00000361138 A0A087WWL8 130 aa11.12□□□□□ -0.63
SMC5-201ENST00000361138 NDUFB8O95169 186 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 F8VRH5 84 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 ANKRD39Q53RE8 183 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 CD59P13987 128 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 SPXQ9BT56 116 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 KIF26AQ9ULI4 1882 aaPredicted RBP11.11□□□□□ -0.63
SMC5-201ENST00000361138 LGALS1P09382 135 aaKnown RBP11.11□□□□□ -0.63
SMC5-201ENST00000361138 NEGR1Q7Z3B1 354 aa11.11□□□□□ -0.63
SMC5-201ENST00000361138 TEX36Q5VZQ5 186 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 LINC00527Q9UJ94 153 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 IGLL5B9A064 214 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 DKK1O94907 266 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 C3orf36Q3SXR2 165 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 IGHV3-73A0A0B4J1V6 119 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 MORN5Q5VZ52 161 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 C17orf77Q96MU5 243 aa11.1□□□□□ -0.63
SMC5-201ENST00000361138 EFNA4P52798 201 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms