RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TMEM75Q8N9X5 138 aa12.57□□□□□ -0.4
TRAPPC11-202ENST00000357207 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 FREM1Q5H8C1 2179 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRAV40A0A0B4J280 105 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 K7EN84 100 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 COX8AP10176 69 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRBV19A0A075B6N1 114 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 LY6G6EA0A0G2JKS1 128 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 VCYO14598 125 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 GATA4P43694 442 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 U3KQA8 63 aa12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 CHD3Q12873 2000 aaKnown RBP12.56□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRAV8-4A0A0B4J246 113 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 PRTN3P24158 256 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 C9orf118A6NHY6 69 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 HAX1O00165 279 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 CKS1BP61024 79 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 NDPQ00604 133 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 ZFAND6Q6FIF0 208 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 PLXNB3Q9ULL4 1909 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 A0A0U1RRA0 63 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 POU2AF1Q16633 256 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 VWC2Q2TAL6 325 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 TMEM155Q4W5P6 130 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 Q6ZSR3 168 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 DEFB104AQ8WTQ1 72 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 A0A0G2JNJ9 132 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 PRSS46E5RG02 174 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 ZNF833PQ6ZTB9 187 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 Q9UFV3 132 aa12.55□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
TRAPPC11-202ENST00000357207 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
TRAPPC11-202ENST00000357207 DUX4L9Q6RFH8 374 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC11-202ENST00000357207 ZNF562Q6V9R5 426 aa12.54□□□□□ -0.4
TRAPPC11-202ENST00000357207 M0R2P5 195 aa12.54□□□□□ -0.4
TRAPPC11-202ENST00000357207 Q6ZS92 163 aa12.54□□□□□ -0.4
TRAPPC11-202ENST00000357207 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
TRAPPC11-202ENST00000357207 M0R1W7 72 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 SRSF6Q13247 344 aaKnown RBP12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 TMEM219Q86XT9 240 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 K7EP13 123 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 ERCC8Q13216 396 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 LGALS9CQ6DKI2 356 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 RNF138Q8WVD3 245 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 ARHGAP21Q5T5U3 1957 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRBV7-1A0A0A6YYK4 115 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 NUPR1O60356 82 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 FXYD5Q96DB9 178 aa12.53□□□□□ -0.4
TRAPPC11-202ENST00000357207 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.4
TRAPPC11-202ENST00000357207 ATXN8Q156A1 80 aa12.52□□□□□ -0.4
TRAPPC11-202ENST00000357207 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.4
TRAPPC11-202ENST00000357207 MRPL51Q4U2R6 128 aaKnown RBP12.52□□□□□ -0.41
TRAPPC11-202ENST00000357207 FGF23Q9GZV9 251 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC11-202ENST00000357207 COL8A2P25067 703 aa12.52□□□□□ -0.41
TRAPPC11-202ENST00000357207 MAJINQ3KP22 176 aa12.52□□□□□ -0.41
TRAPPC11-202ENST00000357207 BVES-AS1Q5T3Y7 98 aa12.52□□□□□ -0.41
TRAPPC11-202ENST00000357207 ZNF688P0C7X2 276 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 ETDBQ3ZM63 59 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 Q8TCH9 128 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 C8orf49Q96NF6 230 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 TICRRQ7Z2Z1 1910 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 EML6Q6ZMW3 1958 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 PRSS57Q6UWY2 283 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 SIGLEC8Q9NYZ4 499 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 PRR25Q96S07 402 aa12.51□□□□□ -0.41
TRAPPC11-202ENST00000357207 RBMY1BA6NDE4 496 aaKnown RBP12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 RBMY1EA6NEQ0 496 aaKnown RBP12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 RBMY1DP0C7P1 496 aaKnown RBP12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 RBMY1A1P0DJD3 496 aaKnown RBP12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 RBMY1CP0DJD4 496 aa12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 TMEM14CQ9P0S9 112 aa12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 PEMTQ9UBM1 199 aa12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 LY6HO94772 140 aa12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 MORN3Q6PF18 240 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 PRSS22Q9GZN4 317 aa12.5□□□□□ -0.41
TRAPPC11-202ENST00000357207 IGLV1-44P01699 117 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 SPINK8P0C7L1 97 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 TDRG1Q3Y452 100 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 E7EQL1 145 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 WIPF2Q8TF74 440 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 FCN3O75636 299 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 NDUFB8O95169 186 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 Q6ZVH6 145 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 Q8N8P6 123 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 THAP8Q8NA92 274 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 TPSG1Q9NRR2 321 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 PTPRQQ9UMZ3 2332 aa12.49□□□□□ -0.41
TRAPPC11-202ENST00000357207 LOXP28300 417 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 EFNA4P52798 201 aa12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 C2orf82Q6UX34 121 aa12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 C2orf66Q6UXQ4 117 aa12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
TRAPPC11-202ENST00000357207 ZC2HC1AQ96GY0 325 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms