RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 NPVFQ9HCQ7 196 aa11.16□□□□□ -0.62
PDGFA-201ENST00000354513 UQCC1Q9NVA1 299 aa11.16□□□□□ -0.62
PDGFA-201ENST00000354513 RNF222A6NCQ9 220 aa11.15□□□□□ -0.62
PDGFA-201ENST00000354513 C1QBP02746 253 aa11.15□□□□□ -0.62
PDGFA-201ENST00000354513 PRB4P10163 310 aaPredicted RBP11.15□□□□□ -0.62
PDGFA-201ENST00000354513 AZU1P20160 251 aa11.15□□□□□ -0.62
PDGFA-201ENST00000354513 SLC25A39Q9BZJ4 359 aaPredicted RBP11.15□□□□□ -0.62
PDGFA-201ENST00000354513 DNAH5Q8TE73 4624 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 HMSDA8MTL9 139 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 PFDN1O60925 122 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 INSP01308 110 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 VWC2Q2TAL6 325 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 CYP2G1PQ6ZSU1 146 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 ATP5SQ99766 215 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 SHANK2-AS3Q9BTD1 123 aa11.14□□□□□ -0.63
PDGFA-201ENST00000354513 TRAV12-2A0A075B6T6 113 aa11.13□□□□□ -0.63
PDGFA-201ENST00000354513 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
PDGFA-201ENST00000354513 PLP1P60201 277 aa11.13□□□□□ -0.63
PDGFA-201ENST00000354513 ZFP69Q49AA0 526 aa11.13□□□□□ -0.63
PDGFA-201ENST00000354513 TEPPQ6URK8 271 aa11.13□□□□□ -0.63
PDGFA-201ENST00000354513 GPR82Q96P67 336 aa11.13□□□□□ -0.63
PDGFA-201ENST00000354513 TMEM208Q9BTX3 173 aa11.13□□□□□ -0.63
PDGFA-201ENST00000354513 WFDC1Q9HC57 220 aa11.13□□□□□ -0.63
PDGFA-201ENST00000354513 LYRM9A8MSI8 78 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 BOLA2-SMG1P6H3BVE0 249 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
PDGFA-201ENST00000354513 FGF7P21781 194 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 TSPOP30536 169 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 C15orf53Q8NAA6 179 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 HYLS1Q96M11 299 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 UHRF2Q96PU4 802 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
PDGFA-201ENST00000354513 A0A087X0K7 114 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 IFNA5P01569 189 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 CXCL2P19875 107 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 TNP2Q05952 138 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 RAB31Q13636 194 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 ZNF345Q14585 488 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 C1orf134Q5TEV5 83 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 PATE2Q6UY27 113 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 ZNF738Q8NE65 137 aa11.11□□□□□ -0.63
PDGFA-201ENST00000354513 A0A0D9SG52 128 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 AGPAT2O15120 278 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 LINC00869P0C866 280 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 KCNRGQ8N5I3 272 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 OR8A1Q8NGG7 326 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 SCGB1C1Q8TD33 95 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 MGST2Q99735 147 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 HIGD1AQ9Y241 93 aa11.1□□□□□ -0.63
PDGFA-201ENST00000354513 TAAR5O14804 337 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 MPDU1O75352 247 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 DEFB130BP0DP73 79 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 DEFB130AP0DP74 79 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 CAMLGP49069 296 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 FAM3BP58499 235 aaPredicted RBP11.09□□□□□ -0.63
PDGFA-201ENST00000354513 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
PDGFA-201ENST00000354513 ZNF266Q14584 549 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 KIR3DS1Q14943 382 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
PDGFA-201ENST00000354513 BORCS7-ASMTA0A0B4J1R7 106 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 HYPMO75409 117 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 RPL7P18124 248 aaKnown RBP11.09□□□□□ -0.63
PDGFA-201ENST00000354513 SELENOTP62341 195 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 PSG3Q16557 428 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 TMUB2Q71RG4 321 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 ARPC5LQ9BPX5 153 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 PARD6GQ9BYG4 376 aaPredicted RBP11.09□□□□□ -0.63
PDGFA-201ENST00000354513 ARL6Q9H0F7 186 aa11.09□□□□□ -0.63
PDGFA-201ENST00000354513 NBDYA0A0U1RRE5 68 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 KANTRA0A1W2PQU2 76 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 F5H768 121 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 OR5G3P0C626 314 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 B2MP61769 119 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 LGALSLQ3ZCW2 172 aaPredicted RBP11.08□□□□□ -0.64
PDGFA-201ENST00000354513 SOHLH1Q5JUK2 328 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
PDGFA-201ENST00000354513 RNASE8Q8TDE3 154 aaKnown RBP11.08□□□□□ -0.64
PDGFA-201ENST00000354513 RNF141Q8WVD5 230 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
PDGFA-201ENST00000354513 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
PDGFA-201ENST00000354513 BCL2L11O43521 198 aa11.07□□□□□ -0.64
PDGFA-201ENST00000354513 NKX2-5P52952 324 aaPredicted RBP11.07□□□□□ -0.64
PDGFA-201ENST00000354513 OPCMLQ14982 345 aa11.07□□□□□ -0.64
PDGFA-201ENST00000354513 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
PDGFA-201ENST00000354513 ARV1Q9H2C2 271 aa11.07□□□□□ -0.64
PDGFA-201ENST00000354513 CYTL1Q9NRR1 136 aa11.07□□□□□ -0.64
PDGFA-201ENST00000354513 CBY3A6NI87 242 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 SLC17A3O00476 420 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 NUDT3O95989 172 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 ATP5G1P05496 136 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 SNRPCP09234 159 aaKnown RBP11.06□□□□□ -0.64
PDGFA-201ENST00000354513 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
PDGFA-201ENST00000354513 ATP5G3P48201 142 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 TAS2R60P59551 318 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 RHOBP62745 196 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms