RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 DEFB136Q30KP8 78 aa9.95□□□□□ -0.82
TRIOBP-202ENST00000344404 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
TRIOBP-202ENST00000344404 A0A0A6YYD4 124 aa9.95□□□□□ -0.82
TRIOBP-202ENST00000344404 IGLV3-19P01714 112 aa9.95□□□□□ -0.82
TRIOBP-202ENST00000344404 GUSBP1Q15486 140 aa9.95□□□□□ -0.82
TRIOBP-202ENST00000344404 G3V318 75 aa9.95□□□□□ -0.82
TRIOBP-202ENST00000344404 SOCS3O14543 225 aa9.95□□□□□ -0.82
TRIOBP-202ENST00000344404 SIPA1L1O43166 1804 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 MORN5Q5VZ52 161 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 OVOL2Q9BRP0 275 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 FAM223BA6NKX1 122 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 SEC11AP67812 179 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 FAM223AQ8IWN6 122 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 PLSCR4Q9NRQ2 329 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 ATP6V0E1O15342 81 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 LIME1Q9H400 295 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 ESM1Q9NQ30 184 aa9.94□□□□□ -0.82
TRIOBP-202ENST00000344404 C4orf48Q5BLP8 95 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 MINOS1Q5TGZ0 78 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 USMG5Q96IX5 58 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 MINOS1-NBL1R4GNA1 71 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 MST1LQ2TV78 715 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 CHCHD1Q96BP2 118 aaKnown RBP9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 C8orf49Q96NF6 230 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 GAFA1Q96PS6 74 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 IGKV1D-8A0A087WSZ0 117 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 SLC25A48Q6ZT89 311 aaKnown RBP9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 GGNQ86UU5 652 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 SHISA3A0PJX4 238 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 IGKV1-9A0A0C4DH69 117 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 H0YJW9 148 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 CFHR2P36980 270 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 HIST2H2BCQ6DN03 193 aa9.93□□□□□ -0.82
TRIOBP-202ENST00000344404 A0A1B0GTI1 187 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 CD5P06127 495 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 XCL1P47992 114 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 HSD52Q0P140 79 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 TMEM242Q9NWH2 141 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 GVINP1Q7Z2Y8 2422 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 CRYGCP07315 174 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 LY6G5BQ8NDX9 201 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 ANAPC1Q9H1A4 1944 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 PSG3Q16557 428 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 DAZ1Q9NQZ3 744 aaKnown RBP9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
TRIOBP-202ENST00000344404 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 IL18BPO95998 194 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 ASPHD1Q5U4P2 390 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 NEGR1Q7Z3B1 354 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 WFDC1Q9HC57 220 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 TRAV26-2A0A0B4J265 109 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 HGFACQ04756 655 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 PCNX2A6NKB5 2137 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 A0A1B0GWJ7 208 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 WISP1O95388 367 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 IGHG4P01861 327 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 SIGLEC9Q9Y336 463 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 NDUFS7O75251 213 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 NHLRC3Q5JS37 347 aa9.91□□□□□ -0.82
TRIOBP-202ENST00000344404 LRCOL1A6NCL2 159 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 C9orf139Q6ZV77 190 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 TRPT1Q86TN4 253 aaKnown RBP9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 TP53TG1Q9Y2A0 90 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 NBL1P41271 181 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 M0R1W7 72 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 ZFP36P26651 326 aaKnown RBP9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 MRPL52Q86TS9 123 aaKnown RBP9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 CITED1Q99966 193 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 CHAC1Q9BUX1 264 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 OSTCQ9NRP0 149 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 PKDREJQ9NTG1 2253 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 NDUFS8O00217 210 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 TREML4Q6UXN2 200 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 GNB1LQ9BYB4 327 aa9.9□□□□□ -0.82
TRIOBP-202ENST00000344404 C5orf63A6NC05 138 aa9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 EGR2P11161 476 aaPredicted RBP9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 HEPN1Q6WQI6 88 aa9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 ZNF503Q96F45 646 aa9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 ZNF581Q9P0T4 197 aa9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 SPINK8P0C7L1 97 aa9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 FAM120AOSQ5T036 256 aa9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 RPP25LQ8N5L8 163 aaKnown RBP9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 TMEM170AQ8WVE7 144 aa9.9□□□□□ -0.83
TRIOBP-202ENST00000344404 BUB3O43684 328 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 ARMS2P0C7Q2 107 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 NOTCH3Q9UM47 2321 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 IGHV3-30P01768 117 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 IGHV3-33P01772 117 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 IGHV3-30-3P0DP02 117 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 IGHV3-30-5P0DP03 117 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 IGKV1-12A0A0C4DH73 117 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 IGKV1D-12P01611 117 aa9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 NOP10Q9NPE3 64 aaKnown RBP9.89□□□□□ -0.83
TRIOBP-202ENST00000344404 IGKV1-16P04430 117 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms