RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 HIST1H1AQ02539 215 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-202ENST00000339570 DEFB104AQ8WTQ1 72 aa12.72□□□□□ -0.37
SCARB1-202ENST00000339570 ZNF492Q9P255 531 aa12.72□□□□□ -0.37
SCARB1-202ENST00000339570 DKK2Q9UBU2 259 aa12.72□□□□□ -0.37
SCARB1-202ENST00000339570 BUB1B-PAK6H3BSN5 160 aa12.72□□□□□ -0.37
SCARB1-202ENST00000339570 GATA1P15976 413 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-202ENST00000339570 C2orf91Q6ZV80 131 aa12.72□□□□□ -0.37
SCARB1-202ENST00000339570 FAM57AQ8TBR7 257 aa12.72□□□□□ -0.37
SCARB1-202ENST00000339570 CDKN1BP46527 198 aa12.72□□□□□ -0.37
SCARB1-202ENST00000339570 FAM90A27PA6NNH2 459 aa12.71□□□□□ -0.37
SCARB1-202ENST00000339570 ABHD17AQ96GS6 310 aa12.71□□□□□ -0.37
SCARB1-202ENST00000339570 AAMDCQ9H7C9 122 aa12.71□□□□□ -0.37
SCARB1-202ENST00000339570 CRXO43186 299 aaPredicted RBP12.71□□□□□ -0.38
SCARB1-202ENST00000339570 SPRY2O43597 315 aa12.71□□□□□ -0.38
SCARB1-202ENST00000339570 PSG3Q16557 428 aa12.71□□□□□ -0.38
SCARB1-202ENST00000339570 SAPCD1Q5SSQ6 148 aa12.71□□□□□ -0.38
SCARB1-202ENST00000339570 I3L2K1 104 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 SH2D1AO60880 128 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 SIGLEC15Q6ZMC9 328 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 C1RLQ9NZP8 487 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 ZNF207O43670 478 aaKnown RBP12.7□□□□□ -0.38
SCARB1-202ENST00000339570 NPYP01303 97 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 COX8AP10176 69 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 ERCC8Q13216 396 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 K7EIM0 57 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 GCSHP23434 173 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 GRNP28799 593 aaKnown RBP12.7□□□□□ -0.38
SCARB1-202ENST00000339570 DLX6P56179 175 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 LINC01545Q5VT33 79 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 Q6ZS92 163 aa12.7□□□□□ -0.38
SCARB1-202ENST00000339570 VSTM5A8MXK1 200 aa12.69□□□□□ -0.38
SCARB1-202ENST00000339570 CT83Q5H943 113 aa12.69□□□□□ -0.38
SCARB1-202ENST00000339570 ZNF491Q8N8L2 437 aa12.69□□□□□ -0.38
SCARB1-202ENST00000339570 NUP37Q8NFH4 326 aa12.69□□□□□ -0.38
SCARB1-202ENST00000339570 JMJD8Q96S16 334 aa12.69□□□□□ -0.38
SCARB1-202ENST00000339570 VGLL1Q99990 258 aa12.69□□□□□ -0.38
SCARB1-202ENST00000339570 PEF1Q9UBV8 284 aaKnown RBP12.69□□□□□ -0.38
SCARB1-202ENST00000339570 SOX21Q9Y651 276 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-202ENST00000339570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.69□□□□□ -0.383e-7■■■□□ 14.7
SCARB1-202ENST00000339570 ZNF414Q96IQ9 312 aa12.69□□□□□ -0.38
SCARB1-202ENST00000339570 PRSS1P07477 247 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 TMEM30BQ3MIR4 351 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 MRPL51Q4U2R6 128 aaKnown RBP12.68□□□□□ -0.38
SCARB1-202ENST00000339570 SHANK2-AS3Q9BTD1 123 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 GFRA4Q9GZZ7 299 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 CUBNO60494 3623 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 A0A096LNJ9 63 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 KIR3DS1Q14943 382 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 K7ERJ3 54 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 CD5LO43866 347 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 RNF182Q8N6D2 247 aa12.68□□□□□ -0.38
SCARB1-202ENST00000339570 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-202ENST00000339570 ORMDL3Q8N138 153 aa12.67□□□□□ -0.38
SCARB1-202ENST00000339570 MTURNQ8N3F0 131 aa12.67□□□□□ -0.38
SCARB1-202ENST00000339570 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
SCARB1-202ENST00000339570 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-202ENST00000339570 NPIPB6E9PJ23 425 aa12.67□□□□□ -0.38
SCARB1-202ENST00000339570 EGR2P11161 476 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-202ENST00000339570 RPL24P83731 157 aaKnown RBP12.67□□□□□ -0.38
SCARB1-202ENST00000339570 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
SCARB1-202ENST00000339570 FCER1GP30273 86 aa12.67□□□□□ -0.38
SCARB1-202ENST00000339570 CREBBPQ92793 2442 aa12.66□□□□□ -0.38
SCARB1-202ENST00000339570 GOSR1O95249 250 aa12.66□□□□□ -0.38
SCARB1-202ENST00000339570 LINC00311Q8N616 119 aa12.66□□□□□ -0.38
SCARB1-202ENST00000339570 CHD8Q9HCK8 2581 aa12.66□□□□□ -0.38
SCARB1-202ENST00000339570 A1L4Q6 167 aa12.66□□□□□ -0.38
SCARB1-202ENST00000339570 IGLV1-47P01700 117 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 RBPJQ06330 500 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 ASCL5Q7RTU5 278 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 MS4A6AQ9H2W1 248 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 SHISA9B4DS77 424 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 H3BRN7 92 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 FAM71F2Q6NXP2 309 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 UFC1Q9Y3C8 167 aa12.65□□□□□ -0.38
SCARB1-202ENST00000339570 TRAV26-2A0A0B4J265 109 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 FAM104BQ5XKR9 115 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 A0A0G2JLM5 398 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 PIP4P1Q86T03 277 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 FER1L6-AS1Q8NA97 138 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 HRNRQ86YZ3 2850 aaPredicted RBP12.64□□□□□ -0.39
SCARB1-202ENST00000339570 CRYGBP07316 175 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 LEPP41159 167 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 ECSCRQ19T08 205 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 Q6ZQT7 251 aa12.64□□□□□ -0.39
SCARB1-202ENST00000339570 K7ERU9 68 aa12.63□□□□□ -0.39
SCARB1-202ENST00000339570 HBDP02042 147 aa12.63□□□□□ -0.39
SCARB1-202ENST00000339570 OVOL3O00110 214 aa12.63□□□□□ -0.39
SCARB1-202ENST00000339570 NDPQ00604 133 aa12.63□□□□□ -0.39
SCARB1-202ENST00000339570 TMEM160Q9NX00 188 aa12.63□□□□□ -0.39
SCARB1-202ENST00000339570 IGKV2D-26A0A0A0MRZ7 120 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 NBR2O15453 112 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 FOXC2Q99958 501 aa12.62□□□□□ -0.39
SCARB1-202ENST00000339570 SPCS1Q9Y6A9 102 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms