RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 OR1N2Q8NGR9 330 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 FMC1Q96HJ9 113 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 GAGE12BA1L429 117 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 NPPCP23582 126 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 ACANP16112 2415 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 LMO4P61968 165 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 IL17RELQ6ZVW7 336 aa9.45□□□□□ -0.9
HDAC6-201ENST00000334136 A0A1B0GWB2 263 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 OVOL3O00110 214 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 IGLL1P15814 213 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 MFAP4P55083 255 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 CHD6Q8TD26 2715 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 ZFP36P26651 326 aaKnown RBP9.44□□□□□ -0.9
HDAC6-201ENST00000334136 RPL13AP40429 203 aaKnown RBP9.44□□□□□ -0.9
HDAC6-201ENST00000334136 LOXL3P58215 753 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 COA6Q5JTJ3 125 aaKnown RBP9.44□□□□□ -0.9
HDAC6-201ENST00000334136 HERVK_113P61574 105 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 PRSS57Q6UWY2 283 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 ARPC1AQ92747 370 aa9.44□□□□□ -0.9
HDAC6-201ENST00000334136 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-201ENST00000334136 MUC3AQ02505 3323 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 OR11H12B2RN74 326 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 LOXL1Q08397 574 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-201ENST00000334136 OR11H1Q8NG94 326 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 OR11H2Q8NH07 326 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 C5orf30Q96GV9 206 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 PYGO2Q9BRQ0 406 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 GGTLC3B5MD39 225 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 MOB4Q9Y3A3 225 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 V9GYV3 84 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 H0YJW9 148 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 NCR2O95944 276 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 MTORP42345 2549 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 C2CD3Q4AC94 2353 aa9.43□□□□□ -0.9
HDAC6-201ENST00000334136 PMS2P5A8MQ11 134 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 LINC00311Q8N616 119 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 RABAC1Q9UI14 185 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 FAM90A9PA6NNJ1 464 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 PRSS2P07478 247 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 RPL15P61313 204 aaKnown RBP9.42□□□□□ -0.9
HDAC6-201ENST00000334136 PSMG3-AS1Q96PY0 264 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 EVI2AP22794 236 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 FAM71F2Q6NXP2 309 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 TEX43Q6ZNM6 134 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
HDAC6-201ENST00000334136 C16orf92Q96LL3 132 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 RNF5Q99942 180 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 MRPL27Q9P0M9 148 aaKnown RBP9.42□□□□□ -0.9
HDAC6-201ENST00000334136 PSG8Q9UQ74 426 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 NPIPB5A8MRT5 1133 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 M0R381 172 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 APOMO95445 188 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 ZNF134P52741 427 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 SAMD13Q5VXD3 122 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 FER1L6-AS1Q8NA97 138 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 IFI27L1Q96BM0 104 aa9.42□□□□□ -0.9
HDAC6-201ENST00000334136 DMXL2Q8TDJ6 3036 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 KIR2DL5BA0A0G2JN68 375 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 KIR2DL5BA0A0G2JPC4 375 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 K7EN84 100 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 NDUFA3O95167 84 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 KIR2DL5AQ8N109 375 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
HDAC6-201ENST00000334136 A0A1B0GWJ7 208 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 HBDP02042 147 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 LEPP41159 167 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 ATP5L2Q7Z4Y8 100 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 MRPL16Q9NX20 251 aaKnown RBP9.41□□□□□ -0.9
HDAC6-201ENST00000334136 LINC00527Q9UJ94 153 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 A6NJY4 79 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 TRGV3P03979 118 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 CRIP3Q6Q6R5 217 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
HDAC6-201ENST00000334136 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 FRYQ5TBA9 3013 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 A0A0G2JLM5 398 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 D6R8Y8 96 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 TCRAP04437 139 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 C5orf64Q2M2E5 130 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 PHLDA3Q9Y5J5 127 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 VDAC2P45880 294 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-201ENST00000334136 OTORQ9NRC9 128 aa9.4□□□□□ -0.9
HDAC6-201ENST00000334136 FSTL3O95633 263 aa9.4□□□□□ -0.91
HDAC6-201ENST00000334136 SEC11AP67812 179 aa9.4□□□□□ -0.91
HDAC6-201ENST00000334136 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.91
HDAC6-201ENST00000334136 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.91
HDAC6-201ENST00000334136 OR4X2Q8NGF9 303 aa9.4□□□□□ -0.91
HDAC6-201ENST00000334136 RNASE2P10153 161 aaKnown RBP9.39□□□□□ -0.91
HDAC6-201ENST00000334136 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
HDAC6-201ENST00000334136 OR5AN1Q8NGI8 311 aa9.39□□□□□ -0.91
HDAC6-201ENST00000334136 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms