RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 HOXB5P09067 269 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 HLA-DRB4P13762 266 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 PAX9P55771 341 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 TMEM14EPQ6UXP3 125 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 FAM24BQ8N5W8 94 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 EIF4E3Q8N5X7 224 aaKnown RBP4.61□□□□□ -1.67
SMG1-201ENST00000330588 OR1B1Q8NGR6 318 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 OR11H2Q8NH07 326 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 URGCP-MRPS24S4R325 110 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 HLA-DRB4X5D2U9 266 aa4.61□□□□□ -1.67
SMG1-201ENST00000330588 IGKV3-7A0A075B6H7 116 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 IGHV3-66A0A0C4DH42 116 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 SMIM9A6NGZ8 99 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 H3BMM0 161 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 SOCS3O14543 225 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 TRIAP1O43715 76 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 ADAP1O75689 374 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 PTTG1O95997 202 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 TCRBP04435 133 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 GIG44P09565 113 aaPredicted RBP4.6□□□□□ -1.67
SMG1-201ENST00000330588 METTL15P1P0C7V9 234 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 ZNF688P0C7X2 276 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 IAPPP10997 89 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 GALR1P47211 349 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 ZNF90Q03938 601 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 COX19Q49B96 90 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 SPANXN5Q5MJ07 72 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 LEMD1Q68G75 181 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 FOXI2Q6ZQN5 318 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 Q8NAQ8 132 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 CSNK1G2-AS1Q8NCQ2 148 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 MAGT1Q9H0U3 335 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 C20orf85Q9H1P6 137 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 PSENENQ9NZ42 101 aa4.6□□□□□ -1.67
SMG1-201ENST00000330588 TEX48A0A1B0GUV7 120 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 TMEM189A5PLL7 270 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 CXorf65A6NEN9 183 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 SCO1O75880 301 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 AMBPP02760 352 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 CXCL2P19875 107 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 LYZP61626 148 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 AKR1C1Q04828 323 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 FGL1Q08830 312 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 IAH1Q2TAA2 248 aaPredicted RBP4.59□□□□□ -1.67
SMG1-201ENST00000330588 PSMG4Q5JS54 123 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 ACOT7LQ6ZUV0 252 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 MTURNQ8N3F0 131 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 OR10P1Q8NGE3 313 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 ZNF431Q8TF32 576 aaPredicted RBP4.59□□□□□ -1.67
SMG1-201ENST00000330588 LINC00476Q8WZB0 136 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 NPVFQ9HCQ7 196 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 FLVCR2Q9UPI3 526 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
SMG1-201ENST00000330588 A0A087X0K7 114 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 ZNF705FA8MVS1 300 aaPredicted RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 KRBOX1C9JBD0 128 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 H3BRN7 92 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 DEDDO75618 318 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 IL5P05113 134 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 ZNF705DP0CH99 300 aaPredicted RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 ZNF705BP0CI00 300 aaPredicted RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 RPL7P18124 248 aaKnown RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 ANXA7P20073 488 aaKnown RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 C4BPBP20851 252 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 HERV-K104P63124 156 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 ZNF846Q147U1 533 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 ACTL10Q5JWF8 245 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 LGALS9CQ6DKI2 356 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 ZNF705AQ6ZN79 300 aaPredicted RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 CYP2G1PQ6ZSU1 146 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 ZNF546Q86UE3 836 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 OR8I2Q8N0Y5 310 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 C11orf45Q8TAV5 145 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 PHLDA1Q8WV24 401 aaPredicted RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 SHANK2-AS3Q9BTD1 123 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 TMEM208Q9BTX3 173 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 PBDC1Q9BVG4 233 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 TMEM147Q9BVK8 224 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 RPRMQ9NS64 109 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 GSKIPQ9P0R6 139 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 RCL1Q9Y2P8 373 aaKnown RBP4.58□□□□□ -1.68
SMG1-201ENST00000330588 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
SMG1-201ENST00000330588 A0A0J9YX75 114 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 C5orf52A6NGY3 159 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 KNCNA6PVL3 124 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 SSSCA1O60232 199 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 IFNA5P01569 189 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 MBPP02686 304 aaPredicted RBP4.57□□□□□ -1.68
SMG1-201ENST00000330588 ZNF25P17030 456 aaPredicted RBP4.57□□□□□ -1.68
SMG1-201ENST00000330588 S100A11P31949 105 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 EWSR1Q01844 656 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMG1-201ENST00000330588 IL15RAQ13261 267 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 BTN1A1Q13410 526 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 ZFP69Q49AA0 526 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 C12orf45Q8N5I9 185 aaPredicted RBP4.57□□□□□ -1.68
SMG1-201ENST00000330588 C2orf50Q96LR7 162 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 SLC25A39Q9BZJ4 359 aaPredicted RBP4.57□□□□□ -1.68
SMG1-201ENST00000330588 SLC25A32Q9H2D1 315 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms