RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 C21orf62Q9NYP8 219 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 C16orf92Q96LL3 132 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 EPG5Q9HCE0 2579 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 IGLV1-44P01699 117 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 DAZAP2Q15038 168 aaPredicted RBP12.27□□□□□ -0.45
VARS2-201ENST00000321897 BRWD1-AS2P59051 145 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 OR5A1Q8NGJ0 315 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 FMC1Q96HJ9 113 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 IGKV2-40A0A087WW87 121 aaPredicted RBP12.26□□□□□ -0.45
VARS2-201ENST00000321897 IGKV2D-40P01614 121 aaPredicted RBP12.26□□□□□ -0.45
VARS2-201ENST00000321897 FAM106CPP0CH98 169 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 CSTL1Q9H114 145 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 TMEM14BQ9NUH8 114 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 LRP4O75096 1905 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 TCRAP04437 139 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 BRD3OSQ6XYD6 125 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 RITA1Q96K30 269 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 VKORC1Q9BQB6 163 aa12.26□□□□□ -0.45
VARS2-201ENST00000321897 PKD1L2Q7Z442 2459 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 RNF125Q96EQ8 232 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 PSG8Q9UQ74 426 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 E7EUB6 86 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 TAX1BP3O14907 124 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 PRSS2P07478 247 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 OR4X2Q8NGF9 303 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 NBR2O15453 112 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 ZNF329Q86UD4 541 aa12.25□□□□□ -0.45
VARS2-201ENST00000321897 CFAP47Q6ZTR5 3102 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 IGLV3-9A0A075B6K5 115 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 TMEM213A2RRL7 107 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 ZC2HC1BQ5TFG8 222 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 CENPVQ7Z7K6 275 aaPredicted RBP12.24□□□□□ -0.45
VARS2-201ENST00000321897 OR5AN1Q8NGI8 311 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 ARPC1AQ92747 370 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 ATP5J2P56134 94 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 TTTY13Q9BZ97 58 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 TNRC6AQ8NDV7 1962 aaKnown RBP12.24□□□□□ -0.45
VARS2-201ENST00000321897 M0R381 172 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 LYZL1Q6UWQ5 148 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 DEFB125Q8N687 156 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 JMJD8Q96S16 334 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 CTSZQ9UBR2 303 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 SIGLEC9Q9Y336 463 aa12.24□□□□□ -0.45
VARS2-201ENST00000321897 SOX21Q9Y651 276 aaPredicted RBP12.24□□□□□ -0.45
VARS2-201ENST00000321897 AZU1P20160 251 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 NDPQ00604 133 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 LYRM7Q5U5X0 104 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 C1orf229Q6ZS94 237 aaPredicted RBP12.23□□□□□ -0.45
VARS2-201ENST00000321897 CYSLTR1Q9Y271 337 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 LOXP28300 417 aaPredicted RBP12.23□□□□□ -0.45
VARS2-201ENST00000321897 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 C11orf52Q96A22 123 aa12.23□□□□□ -0.45
VARS2-201ENST00000321897 TMEM167AQ8TBQ9 72 aa12.22□□□□□ -0.45
VARS2-201ENST00000321897 SRSF8Q9BRL6 282 aaKnown RBP12.22□□□□□ -0.45
VARS2-201ENST00000321897 BMI1P35226 326 aa12.22□□□□□ -0.45
VARS2-201ENST00000321897 SMAD7O15105 426 aaKnown RBP12.22□□□□□ -0.45
VARS2-201ENST00000321897 FN1P02751 2386 aaKnown RBP12.22□□□□□ -0.45
VARS2-201ENST00000321897 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
VARS2-201ENST00000321897 KLRB1Q12918 225 aa12.22□□□□□ -0.45
VARS2-201ENST00000321897 PCP2Q8IVA1 136 aa12.22□□□□□ -0.45
VARS2-201ENST00000321897 IGKV1OR2-108A0A075B7D4 117 aa12.21□□□□□ -0.45
VARS2-201ENST00000321897 C9orf118A6NHY6 69 aa12.21□□□□□ -0.45
VARS2-201ENST00000321897 TTC32Q5I0X7 151 aa12.21□□□□□ -0.45
VARS2-201ENST00000321897 DUX5Q96PT3 197 aa12.21□□□□□ -0.45
VARS2-201ENST00000321897 SLC25A39Q9BZJ4 359 aaPredicted RBP12.21□□□□□ -0.45
VARS2-201ENST00000321897 FAM74A4Q5TZK3 123 aa12.21□□□□□ -0.46
VARS2-201ENST00000321897 NCKAP5O14513 1909 aa12.21□□□□□ -0.46
VARS2-201ENST00000321897 RPL13AP40429 203 aaKnown RBP12.21□□□□□ -0.46
VARS2-201ENST00000321897 TRGV3P03979 118 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 ANKRD39Q53RE8 183 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 TMEM238LA0A1B0GVL6 79 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 A6NJY4 79 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 BUB1B-PAK6H3BSN5 160 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 RASL11AQ6T310 242 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 OR9G4Q8NGQ1 327 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 C17orf77Q96MU5 243 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 H3BMG7 143 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 COX8AP10176 69 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 RHOGP84095 191 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 TMEM170BQ5T4T1 132 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 PRO3102Q9H379 93 aa12.2□□□□□ -0.46
VARS2-201ENST00000321897 C1orf122Q6ZSJ8 110 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 SH2D6Q7Z4S9 175 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 MAPK1IP1LQ8NDC0 245 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 MRPL36Q9P0J6 103 aaKnown RBP12.19□□□□□ -0.46
VARS2-201ENST00000321897 HERVK_113P61574 105 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 PIP4P1Q86T03 277 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 METTL26Q96S19 204 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 OTORQ9NRC9 128 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 SLC25A2Q9BXI2 301 aa12.19□□□□□ -0.46
VARS2-201ENST00000321897 PRR20EP86478 221 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 PRR20CP86479 221 aa12.18□□□□□ -0.46
VARS2-201ENST00000321897 PRR20DP86480 221 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms