RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 HLA-DRB5Q30154 266 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 C2orf83Q53S99 150 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 LCN15Q6UWW0 184 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 SMIM15Q7Z3B0 74 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 LY6G5BQ8NDX9 201 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 CLDND2Q8NHS1 167 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM167AQ8TBQ9 72 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 RPEQ96AT9 228 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 P2RX4Q99571 388 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 RNF5Q99942 180 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 MAP1LC3CQ9BXW4 147 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 MAP1LC3BQ9GZQ8 125 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 NDUFA4L2Q9NRX3 87 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 ZNRD1Q9P1U0 126 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 LOC400499M0QZD8 3231 aa2.76□□□□□ -1.97
SMCO3-201ENST00000316048 IGHV1-3A0A0C4DH29 117 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 C9JQL5 133 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 INS-IGF2F8WCM5 200 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 M0R036 132 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 LY6HO94772 140 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 MT-CO2P00403 227 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 INSP01308 110 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 SRP19P09132 144 aaKnown RBP2.75□□□□□ -1.97
SMCO3-201ENST00000316048 OR13C7P0DN81 318 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 PRTN3P24158 256 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 HTR1DP28221 377 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 GPX4P36969 197 aaPredicted RBP2.75□□□□□ -1.97
SMCO3-201ENST00000316048 PSMB3P49720 205 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 RND2P52198 227 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 LCN2P80188 198 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SMCO3-201ENST00000316048 SLC35E3Q7Z769 313 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 RPP25LQ8N5L8 163 aaKnown RBP2.75□□□□□ -1.97
SMCO3-201ENST00000316048 OR11H6Q8NGC7 330 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 RXFP4Q8TDU9 374 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 C22orf15Q8WYQ4 148 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 VSIRQ9H7M9 311 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 SIRT7Q9NRC8 400 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 SMCO4Q9NRQ5 59 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 GNG13Q9P2W3 67 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 VAX2Q9UIW0 290 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 GOLT1BQ9Y3E0 138 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 DSCAML1Q8TD84 2053 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 YLPM1P49750 1951 aaKnown RBP2.75□□□□□ -1.97
SMCO3-201ENST00000316048 FRYQ5TBA9 3013 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 A0A1B0GV90 55 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 LY6LH3BQJ8 138 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 DNASE2O00115 360 aaPredicted RBP2.75□□□□□ -1.97
SMCO3-201ENST00000316048 ZNF861PO60384 105 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 IGLV2-23P01705 113 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 NBEAP1P0C6P0 100 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 BCL2P10415 239 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 RHOBP62745 196 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 DIAPH2-AS1Q14236 149 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 RHEBQ15382 184 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM144Q7Z5S9 345 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 OR4P4Q8NGL7 312 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 RNASEH2CQ8TDP1 164 aaKnown RBP2.75□□□□□ -1.97
SMCO3-201ENST00000316048 TVP23CQ96ET8 276 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 SLC35E1Q96K37 410 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 TXNDC17Q9BRA2 123 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 MANBALQ9NQG1 85 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 PXMP4Q9Y6I8 212 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 KIF25-AS1Q9Y6Z4 181 aa2.75□□□□□ -1.97
SMCO3-201ENST00000316048 ASPMQ8IZT6 3477 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 ANKRD11Q6UB99 2663 aaPredicted RBP2.74□□□□□ -1.97
SMCO3-201ENST00000316048 IGHV3-72A0A0B4J1Y9 119 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 C7orf77A4D0Y5 90 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 OOSP1A8MZH6 123 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 B4DEV8 164 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 SEC14L6B5MCN3 397 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 H3BQ15 152 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 C19orf84I3L1E1 186 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 CORTO00230 105 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 CXorf1O96002 111 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 OXTP01178 125 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 IGKV1D-33P01593 117 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 IGKV1-33P01594 117 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 RNASE2P10153 161 aaKnown RBP2.74□□□□□ -1.97
SMCO3-201ENST00000316048 RPL27AP46776 148 aaKnown RBP2.74□□□□□ -1.97
SMCO3-201ENST00000316048 MEF2BQ02080 365 aaPredicted RBP2.74□□□□□ -1.97
SMCO3-201ENST00000316048 PLGLAQ15195 96 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 VAMP3Q15836 100 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 PRSS8Q16651 343 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 BSXQ3C1V8 233 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 COX19Q49B96 90 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 AKIRIN2Q53H80 203 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 TPTE2P1Q5T6R2 138 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 Q8N7P7 452 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 OR10W1Q8NGF6 305 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 TMEM158Q8WZ71 300 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 MGST2Q99735 147 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 TUBA4BQ9H853 241 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 ZNF430Q9H8G1 570 aaPredicted RBP2.74□□□□□ -1.97
SMCO3-201ENST00000316048 PRR34Q9NV39 138 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 METTL1Q9UBP6 276 aaKnown RBP2.74□□□□□ -1.97
SMCO3-201ENST00000316048 SMPXQ9UHP9 88 aa2.74□□□□□ -1.97
SMCO3-201ENST00000316048 ICE1Q9Y2F5 2266 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms