RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 NPIPB5A8MRT5 1133 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 GNG7O60262 68 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 RHOGP84095 191 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 PVRIGQ6DKI7 326 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 RAB37Q96AX2 223 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 H3BRN7 92 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 Q8NA96 180 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 C1RLQ9NZP8 487 aa13.03□□□□□ -0.32
SSH3-201ENST00000308127 CT45A10P0DMU9 189 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 C8orf31Q8N9H6 132 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 OR10AG1Q8NH19 301 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 VPS25Q9BRG1 176 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 TTTY13Q9BZ97 58 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 TRAV30A0A087WSZ9 112 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 IGHV3-66A0A0C4DH42 116 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 FAM90A27PA6NNH2 459 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 SH2D1AO60880 128 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 PRELID3AQ96N28 172 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 THYN1Q9P016 225 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 KAAG1Q9UBP8 84 aa13.02□□□□□ -0.33
SSH3-201ENST00000308127 C7orf71A4D174 169 aa13.01□□□□□ -0.33
SSH3-201ENST00000308127 TMEM189A5PLL7 270 aa13.01□□□□□ -0.33
SSH3-201ENST00000308127 NCBP2LA6PVI3 153 aaKnown RBP13.01□□□□□ -0.33
SSH3-201ENST00000308127 ZNF80P51504 273 aaPredicted RBP13.01□□□□□ -0.33
SSH3-201ENST00000308127 CST9LQ9H4G1 147 aa13.01□□□□□ -0.33
SSH3-201ENST00000308127 HOXB4P17483 251 aaPredicted RBP13.01□□□□□ -0.33
SSH3-201ENST00000308127 CSN1S1P47710 185 aa13.01□□□□□ -0.33
SSH3-201ENST00000308127 C12orf54Q6X4T0 127 aa13.01□□□□□ -0.33
SSH3-201ENST00000308127 VSTM5A8MXK1 200 aa13□□□□□ -0.33
SSH3-201ENST00000308127 K7EP13 123 aa13□□□□□ -0.33
SSH3-201ENST00000308127 K7EQM0 130 aa13□□□□□ -0.33
SSH3-201ENST00000308127 NMUP48645 174 aa13□□□□□ -0.33
SSH3-201ENST00000308127 NDPQ00604 133 aa13□□□□□ -0.33
SSH3-201ENST00000308127 VGLL1Q99990 258 aa13□□□□□ -0.33
SSH3-201ENST00000308127 FAM231BA6NCW3 169 aa13□□□□□ -0.33
SSH3-201ENST00000308127 HIST1H1AQ02539 215 aaPredicted RBP13□□□□□ -0.33
SSH3-201ENST00000308127 TWIST1Q15672 202 aa13□□□□□ -0.33
SSH3-201ENST00000308127 C16orf54Q6UWD8 224 aa13□□□□□ -0.33
SSH3-201ENST00000308127 PCP2Q8IVA1 136 aa13□□□□□ -0.33
SSH3-201ENST00000308127 RABAC1Q9UI14 185 aa13□□□□□ -0.33
SSH3-201ENST00000308127 K7EMI3 77 aa12.99□□□□□ -0.33
SSH3-201ENST00000308127 NPYP01303 97 aa12.99□□□□□ -0.33
SSH3-201ENST00000308127 COX8AP10176 69 aa12.99□□□□□ -0.33
SSH3-201ENST00000308127 EVI2AP22794 236 aa12.99□□□□□ -0.33
SSH3-201ENST00000308127 MRPL51Q4U2R6 128 aaKnown RBP12.99□□□□□ -0.33
SSH3-201ENST00000308127 EGR2P11161 476 aaPredicted RBP12.99□□□□□ -0.33
SSH3-201ENST00000308127 IGHV3-49A0A0A0MS15 119 aa12.99□□□□□ -0.33
SSH3-201ENST00000308127 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
SSH3-201ENST00000308127 SAP30O75446 220 aa12.99□□□□□ -0.33
SSH3-201ENST00000308127 GATA1P15976 413 aaPredicted RBP12.99□□□□□ -0.33
SSH3-201ENST00000308127 DKK2Q9UBU2 259 aa12.99□□□□□ -0.33
SSH3-201ENST00000308127 APOBEC3AP31941 199 aaPredicted RBP12.98□□□□□ -0.33
SSH3-201ENST00000308127 AAMDCQ9H7C9 122 aa12.98□□□□□ -0.33
SSH3-201ENST00000308127 CHD8Q9HCK8 2581 aa12.98□□□□□ -0.33
SSH3-201ENST00000308127 NCOR2Q9Y618 2525 aa12.98□□□□□ -0.33
SSH3-201ENST00000308127 CKS2P33552 79 aa12.98□□□□□ -0.33
SSH3-201ENST00000308127 ERCC8Q13216 396 aa12.98□□□□□ -0.33
SSH3-201ENST00000308127 TMEM97Q5BJF2 176 aa12.98□□□□□ -0.33
SSH3-201ENST00000308127 NBR2O15453 112 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 CD3EP07766 207 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 JMJD8Q96S16 334 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 GAGE12BA1L429 117 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 ORM1P02763 201 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 TMEM11P17152 192 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 CDKN1BP46527 198 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 OCIAD2Q56VL3 154 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 DYNAPQ8N1N2 210 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 FANCD2OSQ96PS1 177 aa12.97□□□□□ -0.33
SSH3-201ENST00000308127 H3BUT2 72 aa12.96□□□□□ -0.33
SSH3-201ENST00000308127 ZNF672Q499Z4 452 aaPredicted RBP12.96□□□□□ -0.33
SSH3-201ENST00000308127 FAM104BQ5XKR9 115 aa12.96□□□□□ -0.33
SSH3-201ENST00000308127 RNF182Q8N6D2 247 aa12.96□□□□□ -0.33
SSH3-201ENST00000308127 ORMDL3Q8N138 153 aa12.96□□□□□ -0.34
SSH3-201ENST00000308127 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.34
SSH3-201ENST00000308127 CD5LO43866 347 aa12.95□□□□□ -0.34
SSH3-201ENST00000308127 FGF6P10767 208 aa12.95□□□□□ -0.34
SSH3-201ENST00000308127 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
SSH3-201ENST00000308127 F8W735 103 aaPredicted RBP12.95□□□□□ -0.34
SSH3-201ENST00000308127 Q6ZQT7 251 aa12.95□□□□□ -0.34
SSH3-201ENST00000308127 LY6LH3BQJ8 138 aa12.94□□□□□ -0.34
SSH3-201ENST00000308127 CDSNQ15517 529 aa12.94□□□□□ -0.34
SSH3-201ENST00000308127 TNFRSF14Q92956 283 aa12.94□□□□□ -0.34
SSH3-201ENST00000308127 JKAMPQ9P055 326 aa12.94□□□□□ -0.34
SSH3-201ENST00000308127 ZNF207O43670 478 aaKnown RBP12.94□□□□□ -0.34
SSH3-201ENST00000308127 RIPPLY3P57055 190 aa12.94□□□□□ -0.34
SSH3-201ENST00000308127 SPG11Q96JI7 2443 aa12.93□□□□□ -0.34
SSH3-201ENST00000308127 B9A039 149 aa12.93□□□□□ -0.34
SSH3-201ENST00000308127 SPRY2O43597 315 aa12.93□□□□□ -0.34
SSH3-201ENST00000308127 PRR25Q96S07 402 aa12.93□□□□□ -0.34
SSH3-201ENST00000308127 DPM3Q9P2X0 92 aa12.93□□□□□ -0.34
SSH3-201ENST00000308127 WI2-2373I1.2A0A1W2PRP0 233 aa12.93□□□□□ -0.34
SSH3-201ENST00000308127 GAGE10A6NGK3 116 aa12.93□□□□□ -0.34
SSH3-201ENST00000308127 FER1L6-AS1Q8NA97 138 aa12.92□□□□□ -0.34
SSH3-201ENST00000308127 CFHR4Q92496 578 aa12.92□□□□□ -0.34
SSH3-201ENST00000308127 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
SSH3-201ENST00000308127 C21orf62Q9NYP8 219 aa12.92□□□□□ -0.34
SSH3-201ENST00000308127 PEF1Q9UBV8 284 aaKnown RBP12.92□□□□□ -0.34
SSH3-201ENST00000308127 SMAD5-AS1Q9Y6J3 95 aa12.92□□□□□ -0.34
SSH3-201ENST00000308127 SPTBN4Q9H254 2564 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms