RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 OR10G4Q8NGN3 311 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 OR10G7Q8NGN6 311 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 TMED6Q8WW62 240 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 RAB24Q969Q5 203 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 GNPNAT1Q96EK6 184 aaPredicted RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 PHYHIPLQ96FC7 376 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 NARS2Q96I59 477 aaKnown RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 GPR82Q96P67 336 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 FAM110AQ9BQ89 295 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 MRPL32Q9BYC8 188 aaKnown RBP4.35□□□□□ -1.71
SSX3-201ENST00000298396 TMEM14CQ9P0S9 112 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
SSX3-201ENST00000298396 TRBV19A0A075B6N1 114 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 OR4C46A6NHA9 309 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 KNCNA6PVL3 124 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 OR11H12B2RN74 326 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 PRAC2D3DTV9 90 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 F6UB75 175 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.71
SSX3-201ENST00000298396 GIG44P09565 113 aaPredicted RBP4.34□□□□□ -1.71
SSX3-201ENST00000298396 OR10J4P0C629 311 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 SEC11BP0C7V7 166 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 STAG3L2P0CL84 134 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 STAG3L3P0CL85 134 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 ARL14EPLP0DKL9 152 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 IGHV4-30-4P0DP06 118 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 RPL7P18124 248 aaKnown RBP4.34□□□□□ -1.71
SSX3-201ENST00000298396 CDC34P49427 236 aaPredicted RBP4.34□□□□□ -1.71
SSX3-201ENST00000298396 PSMB3P49720 205 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 DEFB131AP59861 70 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 PSMG4Q5JS54 123 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 FAM74A1Q5RGS3 127 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 SLC51BQ86UW2 128 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 BPIFA4PQ86YQ2 179 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 SUN5Q8TC36 379 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 PAXXQ9BUH6 204 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 KRTAP17-1Q9BYP8 105 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 HRH4Q9H3N8 390 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 TMPRSS5Q9H3S3 457 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 SRD5A3Q9H8P0 318 aa4.34□□□□□ -1.71
SSX3-201ENST00000298396 ZNF331Q9NQX6 463 aaPredicted RBP4.34□□□□□ -1.71
SSX3-201ENST00000298396 CTXND1A0A1B0GTU2 59 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 PRSS29PA6NIE9 313 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 A8MTW9 85 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 ZNF705FA8MVS1 300 aaPredicted RBP4.33□□□□□ -1.72
SSX3-201ENST00000298396 A8MZ25 164 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 ISLRO14498 428 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 OR7C2O60412 319 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 FRMD6-AS1P0C7T7 363 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 HIST1H1EP10412 219 aaKnown RBP4.33□□□□□ -1.72
SSX3-201ENST00000298396 TPT1P13693 172 aaKnown RBP4.33□□□□□ -1.72
SSX3-201ENST00000298396 GCHFRP30047 84 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 FGF8P55075 233 aaPredicted RBP4.33□□□□□ -1.72
SSX3-201ENST00000298396 PAFAH1B2P68402 229 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 KHDC3LQ587J8 217 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 LCN15Q6UWW0 184 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 GTSCR1Q86UQ5 136 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 EXOC3-AS1Q8N2X6 119 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 MRAPQ8TCY5 172 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 BLNKQ8WV28 456 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 OR51M1Q9H341 326 aa4.33□□□□□ -1.72
SSX3-201ENST00000298396 A0A0J9YX75 114 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 A0A1W2PPV4 95 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 GAGE12BA1L429 117 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 MAP1LC3B2A6NCE7 125 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 GAGE12HA6NDE8 117 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 H3BMM0 161 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 M0R3E3 92 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 ZNF253O75346 499 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 MBP02144 154 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 NBEAP1P0C6P0 100 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 ZNF705DP0CH99 300 aaPredicted RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 ZNF705BP0CI00 300 aaPredicted RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 C4BPBP20851 252 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 S100A7P31151 101 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 MEOX2P50222 304 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 SULT1A2P50226 295 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 UBE2L3P68036 154 aaKnown RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 CCL20P78556 96 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 PDE6HQ13956 83 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 PSG3Q16557 428 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 AKR1C8PQ5T2L2 129 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 AMTNQ6UX39 209 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 ALKAL2Q6UX46 152 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 PQLC2Q6ZP29 291 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 TRPT1Q86TN4 253 aaKnown RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 SBSPONQ8IVN8 264 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 FAM213BQ8TBF2 198 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 MBD3L1Q8WWY6 194 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 LINC00052Q96N35 136 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 ACTR3CQ9C0K3 210 aaPredicted RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 MAP1LC3BQ9GZQ8 125 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 SAV1Q9H4B6 383 aaPredicted RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 ZMAT5Q9UDW3 170 aaKnown RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 YTHDF2Q9Y5A9 579 aaKnown RBP4.32□□□□□ -1.72
SSX3-201ENST00000298396 STARD9Q9P2P6 4700 aa4.32□□□□□ -1.72
SSX3-201ENST00000298396 NACAE9PAV3 2078 aa4.31□□□□□ -1.72
SSX3-201ENST00000298396 GGTLC3B5MD39 225 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms