RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 VGLL1Q99990 258 aa19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 CELSR1Q9NYQ6 3014 aa19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 TMEM189A5PLL7 270 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 ZNF80P51504 273 aaPredicted RBP19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 MFAP4P55083 255 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 VAMP3Q15836 100 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 HSPB8Q9UJY1 196 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 IGLV11-55A0A075B6I3 123 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 LOC105371242A0A075B767 164 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 NDUFS7O75251 213 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 RNF5Q99942 180 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 ZNF747Q9BV97 191 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 SCRT2Q9NQ03 307 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 C21orf62Q9NYP8 219 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 SELENOKQ9Y6D0 94 aa19.06■□□□□ 0.64
SPTSSA-201ENST00000298130 RELQ04864 619 aaPredicted RBP19.05■□□□□ 0.64
SPTSSA-201ENST00000298130 UBE2V1Q13404 147 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 PET117Q6UWS5 81 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 OR11H6Q8NGC7 330 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 COL12A1Q99715 3063 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 A0A096LNJ9 63 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 EGR2P11161 476 aaPredicted RBP19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 BVES-AS1Q5T3Y7 98 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 SIGLEC8Q9NYZ4 499 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 K7ENP7 123 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 NDUFA3O95167 84 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 MSRB1Q9NZV6 116 aa19.04■□□□□ 0.64
SPTSSA-201ENST00000298130 CSN1S1P47710 185 aa19.03■□□□□ 0.64
SPTSSA-201ENST00000298130 VPS13CQ709C8 3753 aa19.03■□□□□ 0.64
SPTSSA-201ENST00000298130 PPIFP30405 207 aaKnown RBP19.03■□□□□ 0.64
SPTSSA-201ENST00000298130 NPBQ8NG41 125 aa19.03■□□□□ 0.64
SPTSSA-201ENST00000298130 GAS8-AS1O95177 125 aa19.02■□□□□ 0.64
SPTSSA-201ENST00000298130 VMO1Q7Z5L0 202 aa19.02■□□□□ 0.64
SPTSSA-201ENST00000298130 SMAD5-AS1Q9Y6J3 95 aa19.02■□□□□ 0.64
SPTSSA-201ENST00000298130 CEACAM3P40198 252 aa19.02■□□□□ 0.63
SPTSSA-201ENST00000298130 ERCC8Q13216 396 aa19.02■□□□□ 0.63
SPTSSA-201ENST00000298130 LYPD1Q8N2G4 141 aa19.02■□□□□ 0.63
SPTSSA-201ENST00000298130 OR10AG1Q8NH19 301 aa19.02■□□□□ 0.63
SPTSSA-201ENST00000298130 PRELID3AQ96N28 172 aa19.02■□□□□ 0.63
SPTSSA-201ENST00000298130 RAB1BQ9H0U4 201 aa19.02■□□□□ 0.63
SPTSSA-201ENST00000298130 RNF24Q9Y225 148 aa19.02■□□□□ 0.63
SPTSSA-201ENST00000298130 IGHV3-49A0A0A0MS15 119 aa19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 ZFP36P26651 326 aaKnown RBP19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 TWIST1Q15672 202 aa19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 LINC01545Q5VT33 79 aa19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 TRBV6-1A0A0K0K1D8 114 aa19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 TAX1BP3O14907 124 aa19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 ZNF562Q6V9R5 426 aa19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 TIMD4Q96H15 378 aa19.01■□□□□ 0.63
SPTSSA-201ENST00000298130 PIP4P2Q8N4L2 257 aa19■□□□□ 0.63
SPTSSA-201ENST00000298130 SRSF8Q9BRL6 282 aaKnown RBP19■□□□□ 0.63
SPTSSA-201ENST00000298130 MAP1AP78559 2803 aaPredicted RBP19■□□□□ 0.63
SPTSSA-201ENST00000298130 CTSGP08311 255 aa19■□□□□ 0.63
SPTSSA-201ENST00000298130 MRPL51Q4U2R6 128 aaKnown RBP19■□□□□ 0.63
SPTSSA-201ENST00000298130 RNF182Q8N6D2 247 aa19■□□□□ 0.63
SPTSSA-201ENST00000298130 PRR25Q96S07 402 aa19■□□□□ 0.63
SPTSSA-201ENST00000298130 PRTN3P24158 256 aa18.99■□□□□ 0.63
SPTSSA-201ENST00000298130 ECSCRQ19T08 205 aa18.99■□□□□ 0.63
SPTSSA-201ENST00000298130 ODF3BA8MYP8 253 aa18.99■□□□□ 0.63
SPTSSA-201ENST00000298130 ANKRD39Q53RE8 183 aa18.99■□□□□ 0.63
SPTSSA-201ENST00000298130 FAM104BQ5XKR9 115 aa18.99■□□□□ 0.63
SPTSSA-201ENST00000298130 PRAC2D3DTV9 90 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 GPR183P32249 361 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 OR4C5Q8NGB2 326 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 IGHG4P01861 327 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 ORM1P02763 201 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 NPYP01303 97 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 TMEM11P17152 192 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 RHOGP84095 191 aa18.98■□□□□ 0.63
SPTSSA-201ENST00000298130 UQCRFS1P47985 274 aa18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 CACNG7P62955 275 aa18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 ADORA2A-AS1P86434 159 aa18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 TRAV30A0A087WSZ9 112 aa18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 ZNF207O43670 478 aaKnown RBP18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 NHLH1Q02575 133 aa18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 C18orf15Q96N68 181 aa18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 NCOR2Q9Y618 2525 aa18.97■□□□□ 0.63
SPTSSA-201ENST00000298130 CKS2P33552 79 aa18.96■□□□□ 0.63
SPTSSA-201ENST00000298130 CHD8Q9HCK8 2581 aa18.96■□□□□ 0.63
SPTSSA-201ENST00000298130 IGHV7-81A0A0B4J1V7 117 aa18.96■□□□□ 0.63
SPTSSA-201ENST00000298130 SFTPCP11686 197 aa18.96■□□□□ 0.63
SPTSSA-201ENST00000298130 ORMDL3Q8N138 153 aa18.96■□□□□ 0.63
SPTSSA-201ENST00000298130 TTC9CQ8N5M4 171 aa18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 LINC01548A6NM66 108 aa18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 RPL7P18124 248 aaKnown RBP18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 PDE6HQ13956 83 aa18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 AMMECR1LQ6DCA0 310 aa18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 C2orf91Q6ZV80 131 aa18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 ZNF575Q86XF7 245 aa18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 RABAC1Q9UI14 185 aa18.95■□□□□ 0.62
SPTSSA-201ENST00000298130 A0A1W2PPR1 153 aa18.94■□□□□ 0.62
SPTSSA-201ENST00000298130 ZNF493Q6ZR52 646 aa18.94■□□□□ 0.62
SPTSSA-201ENST00000298130 FER1L6-AS1Q8NA97 138 aa18.94■□□□□ 0.62
SPTSSA-201ENST00000298130 IGHV2-70DA0A0C4DH43 119 aa18.94■□□□□ 0.62
SPTSSA-201ENST00000298130 SPTBN4Q9H254 2564 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 EVI2AP22794 236 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 NBL1P41271 181 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 PSG9Q00887 426 aa18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 GATA1P15976 413 aaPredicted RBP18.93■□□□□ 0.62
SPTSSA-201ENST00000298130 C15orf32Q32M92 178 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms