RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 ZNF479Q96JC4 524 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 MORN3Q6PF18 240 aaPredicted RBP12.82□□□□□ -0.36
SHANK3-201ENST00000262795 IGKV1-9A0A0C4DH69 117 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 C5orf63A6NC05 138 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 M0R2P5 195 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 ATXN8Q156A1 80 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 A0A1B0GWJ7 208 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 SRSF2Q01130 221 aaKnown RBP12.82□□□□□ -0.36
SHANK3-201ENST00000262795 PLA2G2CQ5R387 149 aa12.82□□□□□ -0.36
SHANK3-201ENST00000262795 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 A0A087WWC5 75 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 ACACAQ13085 2346 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 TIMM17AQ99595 171 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 AMBPP02760 352 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 OOSP1A8MZH6 123 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 ZNRF2Q8NHG8 242 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 KIF26BQ2KJY2 2108 aa12.81□□□□□ -0.36
SHANK3-201ENST00000262795 COLCA2A8K830 154 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 EFNB3Q15768 340 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 SNHG12Q9BXW3 62 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 IGHG3P01860 377 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 IFI6P09912 130 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 GAS1P54826 345 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 IGHV4-4A0A075B6R2 117 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 PLNP26678 52 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 RPP25LQ8N5L8 163 aaKnown RBP12.8□□□□□ -0.36
SHANK3-201ENST00000262795 RASL10AQ92737 203 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 FRMPD3Q5JV73 1810 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 DLEU1O43261 78 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 LGALS1P09382 135 aaKnown RBP12.8□□□□□ -0.36
SHANK3-201ENST00000262795 IGHV4-38-2P0DP08 117 aa12.8□□□□□ -0.36
SHANK3-201ENST00000262795 KLK5Q9Y337 293 aaPredicted RBP12.8□□□□□ -0.36
SHANK3-201ENST00000262795 hDV102S1A0JD36 115 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 LAGE3Q14657 143 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 LY6G6FQ5SQ64 297 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 GGTLC1Q9BX51 225 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 HS3ST6Q96QI5 342 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 MGST2Q99735 147 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 A0A0A6YYD4 124 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 IGKV1-12A0A0C4DH73 117 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 SS18L2Q9UHA2 77 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 IGKV1-27A0A075B6S5 117 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 LYZL1Q6UWQ5 148 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 C9orf139Q6ZV77 190 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 KIAA1671Q9BY89 1806 aa12.79□□□□□ -0.36
SHANK3-201ENST00000262795 A0A087X0K7 114 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 IGKV1-16P04430 117 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 FNDC1Q4ZHG4 1894 aaPredicted RBP12.78□□□□□ -0.36
SHANK3-201ENST00000262795 IGLV3-32A0A0A0MS00 114 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 CCL18P55774 89 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 TAL2Q16559 108 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 MS4A6AQ9H2W1 248 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 NDUFB8O95169 186 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
SHANK3-201ENST00000262795 ERG28Q9UKR5 140 aa12.78□□□□□ -0.36
SHANK3-201ENST00000262795 C15orf53Q8NAA6 179 aa12.77□□□□□ -0.36
SHANK3-201ENST00000262795 C8orf49Q96NF6 230 aa12.77□□□□□ -0.36
SHANK3-201ENST00000262795 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.36
SHANK3-201ENST00000262795 ORMDL2Q53FV1 153 aa12.77□□□□□ -0.36
SHANK3-201ENST00000262795 C18orf12Q96KH6 178 aa12.77□□□□□ -0.36
SHANK3-201ENST00000262795 F2Z2F3 143 aa12.77□□□□□ -0.37
SHANK3-201ENST00000262795 LINC00271P0C7V0 271 aa12.77□□□□□ -0.37
SHANK3-201ENST00000262795 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.37
SHANK3-201ENST00000262795 WDR81Q562E7 1941 aa12.77□□□□□ -0.37
SHANK3-201ENST00000262795 DPM2O94777 84 aa12.77□□□□□ -0.37
SHANK3-201ENST00000262795 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
SHANK3-201ENST00000262795 VPREB3Q9UKI3 123 aa12.77□□□□□ -0.37
SHANK3-201ENST00000262795 TEX48A0A1B0GUV7 120 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 WT1P19544 449 aaPredicted RBP12.76□□□□□ -0.37
SHANK3-201ENST00000262795 D6R8Y8 96 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 PMVKQ15126 192 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 IGHV4-61A0A0C4DH41 118 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 ITGB1BP1O14713 200 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 Q6AWC8 147 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 ZNF581Q9P0T4 197 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 ADAMTS9Q9P2N4 1935 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 H0YIZ8 118 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 FREM3P0C091 2139 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 B3GALT5-AS1P59052 145 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 H3BMM0 161 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 PYY3Q5JQD4 70 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 UBE2WQ96B02 151 aa12.76□□□□□ -0.37
SHANK3-201ENST00000262795 IGKV1D-8A0A087WSZ0 117 aa12.75□□□□□ -0.37
SHANK3-201ENST00000262795 IGKCP01834 107 aa12.75□□□□□ -0.37
SHANK3-201ENST00000262795 ATP5L2Q7Z4Y8 100 aa12.75□□□□□ -0.37
SHANK3-201ENST00000262795 ADAMTSL5Q6ZMM2 481 aa12.75□□□□□ -0.37
SHANK3-201ENST00000262795 LEPROTO15243 131 aa12.75□□□□□ -0.37
SHANK3-201ENST00000262795 CACNA1DQ01668 2161 aa12.75□□□□□ -0.37
SHANK3-201ENST00000262795 RS1O15537 224 aa12.74□□□□□ -0.37
SHANK3-201ENST00000262795 TRACP01848 142 aa12.74□□□□□ -0.37
SHANK3-201ENST00000262795 XCL1P47992 114 aa12.74□□□□□ -0.37
SHANK3-201ENST00000262795 LINC00114Q6XXX2 140 aa12.74□□□□□ -0.37
SHANK3-201ENST00000262795 ZNF664Q8N3J9 261 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms