RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 SLAQ13239 276 aa10.07□□□□□ -0.8
ARFGEF1-201ENST00000262215 LRRK1Q38SD2 2015 aa10.07□□□□□ -0.8
ARFGEF1-201ENST00000262215 G3V318 75 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 I3L3M4 83 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 C15orf53Q8NAA6 179 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 KIAA2026Q5HYC2 2103 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 SRRM5B3KS81 715 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 CDPF1Q6NVV7 123 aa10.06□□□□□ -0.8
ARFGEF1-201ENST00000262215 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 GAFA1Q96PS6 74 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 A0A0G2JNJ9 132 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 J3QRE1 110 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 SPRY2O43597 315 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 Q9UFV3 132 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 A0A0G2JRQ6 117 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 RNF114Q9Y508 228 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 NHSQ6T4R5 1651 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 ATP6V0E1O15342 81 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 RPL18AQ02543 176 aaKnown RBP10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 C14orf132Q9NPU4 83 aa10.05□□□□□ -0.8
ARFGEF1-201ENST00000262215 SHISA9B4DS77 424 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 CYYR1Q96J86 154 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 ITGB4P16144 1822 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 SDHAF1A6NFY7 115 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 USMG5Q96IX5 58 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 MST1LQ2TV78 715 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 DKK4Q9UBT3 224 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 GTF3C1Q12789 2109 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 TDRD15B5MCY1 1934 aaKnown RBP10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 IFI6P09912 130 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 ARTNQ5T4W7 220 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 KIF26BQ2KJY2 2108 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 C15orf62A8K5M9 175 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 Q6ZVH6 145 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
ARFGEF1-201ENST00000262215 FAM223BA6NKX1 122 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 MINOS1Q5TGZ0 78 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 FAM223AQ8IWN6 122 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 PPDPFLQ8WWR9 84 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 MINOS1-NBL1R4GNA1 71 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 ANKRD29Q8N6D5 301 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 DSCR9P59020 149 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 TEX36Q5VZQ5 186 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 MED12Q93074 2177 aa10.03□□□□□ -0.8
ARFGEF1-201ENST00000262215 TMEM258P61165 79 aa10.02□□□□□ -0.8
ARFGEF1-201ENST00000262215 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.8
ARFGEF1-201ENST00000262215 C8orf31Q8N9H6 132 aa10.02□□□□□ -0.8
ARFGEF1-201ENST00000262215 MRPL27Q9P0M9 148 aaKnown RBP10.02□□□□□ -0.8
ARFGEF1-201ENST00000262215 KLF2Q9Y5W3 355 aaPredicted RBP10.02□□□□□ -0.8
ARFGEF1-201ENST00000262215 B5MCH6 92 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 RHODO00212 210 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 LINC01356Q8N9X3 169 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 USP54Q70EL1 1684 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 IGKV1D-17A0A075B6S4 117 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 LINC01619G3V211 115 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 NDUFB8O95169 186 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 CRYGSP22914 178 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 C9orf118A6NHY6 69 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 UBE2E1P51965 193 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 TMEM14EPQ6UXP3 125 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 C20orf204Q6ZNR8 217 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 MRPS18CQ9Y3D5 142 aaKnown RBP10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 NMSQ5H8A3 153 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 KLHDC3Q9BQ90 382 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 CACNA1EQ15878 2313 aa10.02□□□□□ -0.81
ARFGEF1-201ENST00000262215 NTN5Q8WTR8 489 aaPredicted RBP10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 PTPRFP10586 1907 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 DOCK11Q5JSL3 2073 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 GAGE12HA6NDE8 117 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 A0A1B0GW64 132 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 IL18BPO95998 194 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 Q6ZRM9 215 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 GGNQ86UU5 652 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 WIPF2Q8TF74 440 aaPredicted RBP10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 CFHR4Q92496 578 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 Q96MF0 132 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 FOCADQ5VW36 1801 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 SHANK2-AS3Q9BTD1 123 aa10.01□□□□□ -0.81
ARFGEF1-201ENST00000262215 IGLV10-54A0A075B6I4 117 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 K7EP13 123 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 UTF1Q5T230 341 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 COL6A6A6NMZ7 2263 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 IGLC2P0DOY2 106 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 IGLC3P0DOY3 106 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 C18orf32Q8TCD1 76 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 ESM1Q9NQ30 184 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
ARFGEF1-201ENST00000262215 IGHV1OR15-1A0A075B7D0 117 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
ARFGEF1-201ENST00000262215 K7EMI3 77 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 PRO1854Q9UHT4 67 aa10□□□□□ -0.81
ARFGEF1-201ENST00000262215 PFN1P07737 140 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms