RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 LYPD1Q8N2G4 141 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 ZNF581Q9P0T4 197 aa11.56□□□□□ -0.56
CUX2-201ENST00000261726 IGKV1D-17A0A075B6S4 117 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 CRLF1O75462 422 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 TRAV12-2A0A075B6T6 113 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 NMSQ5H8A3 153 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 RSPO3Q9BXY4 272 aaPredicted RBP11.55□□□□□ -0.56
CUX2-201ENST00000261726 Q0VFX4 171 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 ATP6V0E1O15342 81 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 IGKV1-16P04430 117 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 SLC25A16P16260 332 aa11.55□□□□□ -0.56
CUX2-201ENST00000261726 NTN3O00634 580 aaPredicted RBP11.54□□□□□ -0.56
CUX2-201ENST00000261726 UNQ6494/PRO21346Q6UXR6 183 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 I3L3M4 83 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 RNASE2P10153 161 aaKnown RBP11.54□□□□□ -0.56
CUX2-201ENST00000261726 UBE2V1Q13404 147 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 C15orf62A8K5M9 175 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 PRSS57Q6UWY2 283 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 ZNRF2Q8NHG8 242 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 ABCA7Q8IZY2 2146 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 TSC2P49815 1807 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 TRAV1-1A0A0B4J248 108 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 DOCK4Q8N1I0 1966 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 RNF144BQ7Z419 303 aa11.54□□□□□ -0.56
CUX2-201ENST00000261726 MRPL27Q9P0M9 148 aaKnown RBP11.54□□□□□ -0.56
CUX2-201ENST00000261726 Q6P435 159 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 LHFPL1Q86WI0 220 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 DSCR8Q96T75 97 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 SP5Q6BEB4 398 aaPredicted RBP11.53□□□□□ -0.56
CUX2-201ENST00000261726 SHANK2-AS3Q9BTD1 123 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 NDUFS6O75380 124 aaKnown RBP11.53□□□□□ -0.56
CUX2-201ENST00000261726 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 Q96MF0 132 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 MPDZO75970 2070 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 PRSS29PA6NIE9 313 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
CUX2-201ENST00000261726 FRMPD3Q5JV73 1810 aa11.52□□□□□ -0.56
CUX2-201ENST00000261726 A0A1B0GW64 132 aa11.52□□□□□ -0.56
CUX2-201ENST00000261726 MST1P26927 711 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 DEFB105AQ8NG35 78 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 CLPSL1A2RUU4 121 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 C22orf46C9J442 243 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 CRIPAKQ8N1N5 446 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 CITED1Q99966 193 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 TMEM243Q9BU79 118 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 VWC2Q2TAL6 325 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 ATP6V0BQ99437 205 aa11.52□□□□□ -0.57
CUX2-201ENST00000261726 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 MSMBP08118 114 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 C2orf66Q6UXQ4 117 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 LY96Q9Y6Y9 160 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 INAFM2P0DMQ5 153 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 A0A0G2JRQ6 117 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 TMEM141Q96I45 108 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 IGF2BP2-AS1Q96M15 143 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 PNRC2Q9NPJ4 139 aaKnown RBP11.51□□□□□ -0.57
CUX2-201ENST00000261726 E7EQL1 145 aa11.51□□□□□ -0.57
CUX2-201ENST00000261726 A0A1W2PPI3 338 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 FAM231BA6NCW3 169 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 CACNA1DQ01668 2161 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 AKAP6Q13023 2319 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 G3V318 75 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 HLA-DRB4P13762 266 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 RNASE13Q5GAN3 156 aaKnown RBP11.5□□□□□ -0.57
CUX2-201ENST00000261726 HLA-DRB4X5D2U9 266 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 FANCMQ8IYD8 2048 aa11.5□□□□□ -0.57
CUX2-201ENST00000261726 RHODO00212 210 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 ANGP03950 147 aaKnown RBP11.49□□□□□ -0.57
CUX2-201ENST00000261726 UBE2BP63146 152 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 IGKV1-39P01597 117 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 IGKV1D-39P04432 117 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 PFN1P07737 140 aaKnown RBP11.49□□□□□ -0.57
CUX2-201ENST00000261726 MST1LQ2TV78 715 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 ZNF664Q8N3J9 261 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 PLXNA3P51805 1871 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 KIF26BQ2KJY2 2108 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 NLRC5Q86WI3 1866 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 NDUFB8O95169 186 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 APOC4P55056 127 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 RS1O15537 224 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 IGHG4P01861 327 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 FGF6P10767 208 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 SMIM2Q9BVW6 85 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 TP53BP1Q12888 1972 aaPredicted RBP11.49□□□□□ -0.57
CUX2-201ENST00000261726 A0A1B0GUS0 222 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 FER1L5A0AVI2 2057 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
CUX2-201ENST00000261726 KLHDC3Q9BQ90 382 aa11.49□□□□□ -0.57
CUX2-201ENST00000261726 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
CUX2-201ENST00000261726 PYY3Q5JQD4 70 aa11.48□□□□□ -0.57
CUX2-201ENST00000261726 PRR30Q53SZ7 412 aaPredicted RBP11.48□□□□□ -0.57
CUX2-201ENST00000261726 C5orf47Q569G3 176 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 Q8N8P6 123 aa11.47□□□□□ -0.57
CUX2-201ENST00000261726 MDS2Q8NDY4 140 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms