RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 MPV17L2Q567V2 206 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 ZNF48Q96MX3 618 aaPredicted RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 RBMY1FQ15415 496 aaKnown RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 PYY3Q5JQD4 70 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 ZNF664Q8N3J9 261 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 RPUSD1Q9UJJ7 312 aaKnown RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 SRD5A1P18405 259 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 SSC4DQ8WTU2 575 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 SHANK2-AS3Q9BTD1 123 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 C15orf62A8K5M9 175 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 LINC01545Q5VT33 79 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 ZCCHC24Q8N2G6 241 aaKnown RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 K7EP34 96 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 NDUFB8O95169 186 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 LY6G5BQ8NDX9 201 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 POLR3KQ9Y2Y1 108 aaPredicted RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 TRGV1A0A0A0MS02 117 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 TRACP01848 142 aa3.92□□□□□ -1.78
RC3H1-201ENST00000258349 PPIFP30405 207 aaKnown RBP3.92□□□□□ -1.78
RC3H1-201ENST00000258349 UTF1Q5T230 341 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 SIGLEC9Q9Y336 463 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 C9JAW5 83 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 E9PLN8 166 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 I3L3M4 83 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 NTF4P34130 210 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 HGFACQ04756 655 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 HAPLN4Q86UW8 402 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 FGFBP3Q8TAT2 258 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 TRAV8-3A0A0A6YYJ7 113 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV1-24A0A0C4DH33 117 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 CEND1Q8N111 149 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 RSPO3Q9BXY4 272 aaPredicted RBP3.91□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV3-73A0A0B4J1V6 119 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 GPR179Q6PRD1 2367 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 C14orf178Q8N769 122 aaPredicted RBP3.91□□□□□ -1.78
RC3H1-201ENST00000258349 IL17RELQ6ZVW7 336 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 MYO18BQ8IUG5 2567 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 A0A087WX48 190 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 IGKV1-12A0A0C4DH73 117 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 SOCS3O14543 225 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 IGKV1D-12P01611 117 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 PLSCR4Q9NRQ2 329 aa3.91□□□□□ -1.78
RC3H1-201ENST00000258349 CLPSP04118 112 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 COX8AP10176 69 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 GAFA1Q96PS6 74 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 RFNGQ9Y644 331 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 TRAV13-2A0A0B4J235 113 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 TRAV40A0A0B4J280 105 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 ADCYAP1P18509 176 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 PMVKQ15126 192 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 CD177Q8N6Q3 437 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 Q8N8P6 123 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 DSCR8Q96T75 97 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 DAZ1Q9NQZ3 744 aaKnown RBP3.9□□□□□ -1.78
RC3H1-201ENST00000258349 ASCL4Q6XD76 172 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 UBE2DNLQ8IWF7 75 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 ABCA2Q9BZC7 2435 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 LINC00473A8K010 186 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 IGHV2-70P01814 119 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 HLA-DMBP28068 263 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 Q8TAT8 98 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 LIME1Q9H400 295 aa3.9□□□□□ -1.78
RC3H1-201ENST00000258349 TRAV3A0A0B4J244 114 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 A0A1W2PPM0 123 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 SIVA1O15304 175 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 PFN1P07737 140 aaKnown RBP3.9□□□□□ -1.79
RC3H1-201ENST00000258349 MAJINQ3KP22 176 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 AMN1Q8IY45 258 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 TMEM14CQ9P0S9 112 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 INS-IGF2F8WCM5 200 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 K7EMI3 77 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 RHODO00212 210 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 RNASE2P10153 161 aaKnown RBP3.9□□□□□ -1.79
RC3H1-201ENST00000258349 ZNF876PQ49A33 203 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 MESP1Q9BRJ9 268 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 COL4A6Q14031 1691 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 SMKR1H3BMG3 65 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 ZFP36L1Q07352 338 aaKnown RBP3.9□□□□□ -1.79
RC3H1-201ENST00000258349 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 C18orf32Q8TCD1 76 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 COLQQ9Y215 455 aaPredicted RBP3.9□□□□□ -1.79
RC3H1-201ENST00000258349 CD24P25063 80 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 MST1P26927 711 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 PRB3Q04118 309 aaPredicted RBP3.9□□□□□ -1.79
RC3H1-201ENST00000258349 PRIMA1Q86XR5 153 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 SNHG12Q9BXW3 62 aa3.9□□□□□ -1.79
RC3H1-201ENST00000258349 SAP30O75446 220 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 ATP6V0BQ99437 205 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 COL27A1Q8IZC6 1860 aaPredicted RBP3.89□□□□□ -1.79
RC3H1-201ENST00000258349 TAL2Q16559 108 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 TMEM219Q86XT9 240 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 NAA38Q9BRA0 125 aaKnown RBP3.89□□□□□ -1.79
RC3H1-201ENST00000258349 CFHR2P36980 270 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 FCN3O75636 299 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 FOXF2Q12947 444 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 C8orf49Q96NF6 230 aa3.89□□□□□ -1.79
RC3H1-201ENST00000258349 A0A0U1RRA0 63 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms