RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DOCK11Q5JSL3 2073 aa15.02■□□□□ -0
SMARCC1-201ENST00000254480 LIME1Q9H400 295 aa15.02■□□□□ -0
SMARCC1-201ENST00000254480 TRAV26-2A0A0B4J265 109 aa15.02■□□□□ -0
SMARCC1-201ENST00000254480 TMEM238C9JI98 176 aa15.02■□□□□ -0
SMARCC1-201ENST00000254480 IGHV1-69DA0A0B4J2H0 117 aa15.02■□□□□ -0
SMARCC1-201ENST00000254480 IGHV1-69P01742 117 aa15.02■□□□□ -0
SMARCC1-201ENST00000254480 RNF166Q96A37 237 aaPredicted RBP15.02■□□□□ -0
SMARCC1-201ENST00000254480 STPG4Q8N801 248 aa15.02□□□□□ -0.01
SMARCC1-201ENST00000254480 CR1LQ2VPA4 569 aa15.02□□□□□ -0.01
SMARCC1-201ENST00000254480 ZC2HC1BQ5TFG8 222 aa15.02□□□□□ -0.01
SMARCC1-201ENST00000254480 NDUFS7O75251 213 aa15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 UBE2E1P51965 193 aa15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 HIST1H4AP62805 103 aaKnown RBP15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 FAM120AOSQ5T036 256 aa15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 CMC4P56277 68 aaPredicted RBP15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 ZNF562Q6V9R5 426 aa15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 ATXN8Q156A1 80 aa15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 NEGR1Q7Z3B1 354 aa15.01□□□□□ -0.01
SMARCC1-201ENST00000254480 C17orf58Q2M2W7 97 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 SPOCK3Q9BQ16 436 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 RNF114Q9Y508 228 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 ADCYAP1P18509 176 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 MPV17L2Q567V2 206 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 PRIMA1Q86XR5 153 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 GRNP28799 593 aaKnown RBP15□□□□□ -0.01
SMARCC1-201ENST00000254480 RASL10AQ92737 203 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 C9JQL5 133 aa15□□□□□ -0.01
SMARCC1-201ENST00000254480 HEATR5AQ86XA9 2040 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 TRAV8-3A0A0A6YYJ7 113 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 GAGE12BA1L429 117 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 SYS1-DBNDD2H3BUS1 97 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 GAGE7O76087 117 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 GAGE12FP0CL80 117 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 GAGE12GP0CL81 117 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 GAGE12IP0CL82 117 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 FAM90A2PQ658T7 463 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 LINC01619G3V211 115 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 TNFRSF6BO95407 300 aa14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 RSPO3Q9BXY4 272 aaPredicted RBP14.99□□□□□ -0.01
SMARCC1-201ENST00000254480 LOXP28300 417 aaPredicted RBP14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 PAX9P55771 341 aa14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 TEX36Q5VZQ5 186 aa14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 C1QTNF4Q9BXJ3 329 aa14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 K7EM74 188 aa14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 SHANK1Q9Y566 2161 aa14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 IGHV2-70DA0A0C4DH43 119 aa14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 TIMM21Q9BVV7 248 aa14.98□□□□□ -0.01
SMARCC1-201ENST00000254480 IGLV3-9A0A075B6K5 115 aa14.97□□□□□ -0.01
SMARCC1-201ENST00000254480 PLEKHB2Q96CS7 222 aa14.97□□□□□ -0.01
SMARCC1-201ENST00000254480 TMEM14BQ9NUH8 114 aa14.97□□□□□ -0.01
SMARCC1-201ENST00000254480 SMPXQ9UHP9 88 aa14.97□□□□□ -0.01
SMARCC1-201ENST00000254480 ARTNQ5T4W7 220 aa14.97□□□□□ -0.01
SMARCC1-201ENST00000254480 ZNF134P52741 427 aa14.97□□□□□ -0.01
SMARCC1-201ENST00000254480 NDUFA4L2Q9NRX3 87 aa14.97□□□□□ -0.01
SMARCC1-201ENST00000254480 A0A1B0GW64 132 aa14.96□□□□□ -0.01
SMARCC1-201ENST00000254480 VWC2LB2RUY7 222 aa14.96□□□□□ -0.01
SMARCC1-201ENST00000254480 ZNF48Q96MX3 618 aaPredicted RBP14.96□□□□□ -0.01
SMARCC1-201ENST00000254480 TCTEX1D4Q5JR98 221 aa14.96□□□□□ -0.01
SMARCC1-201ENST00000254480 LYPD1Q8N2G4 141 aa14.96□□□□□ -0.01
SMARCC1-201ENST00000254480 TP53TG1Q9Y2A0 90 aa14.96□□□□□ -0.01
SMARCC1-201ENST00000254480 PRB1P04280 392 aa14.96□□□□□ -0.02
SMARCC1-201ENST00000254480 PFN2P35080 140 aa14.96□□□□□ -0.02
SMARCC1-201ENST00000254480 Q6ZS49 121 aa14.96□□□□□ -0.02
SMARCC1-201ENST00000254480 PLXNA3P51805 1871 aa14.96□□□□□ -0.02
SMARCC1-201ENST00000254480 WDR81Q562E7 1941 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 SS18Q15532 418 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 FAM215AQ9Y5M1 114 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 DAD1P61803 113 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 PYY3Q5JQD4 70 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 ANAPC13Q9BS18 74 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 DYSFO75923 2080 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 C8orf86Q6ZUL3 223 aa14.95□□□□□ -0.02
SMARCC1-201ENST00000254480 NDUFS8O00217 210 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 IGKV1-39P01597 117 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 IGKV1D-39P04432 117 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 ESDP10768 282 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 OCIAD2Q56VL3 154 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 SIP14410 1827 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 SEC11AP67812 179 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 CLPSL2Q6UWE3 100 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 HAPLN4Q86UW8 402 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 ZNF833PQ6ZTB9 187 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 MRAPQ8TCY5 172 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 MYLKQ15746 1914 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 AZU1P20160 251 aa14.94□□□□□ -0.02
SMARCC1-201ENST00000254480 ITGB1BP1O14713 200 aa14.93□□□□□ -0.02
SMARCC1-201ENST00000254480 RASL11AQ6T310 242 aa14.93□□□□□ -0.02
SMARCC1-201ENST00000254480 MTURNQ8N3F0 131 aa14.93□□□□□ -0.02
SMARCC1-201ENST00000254480 RLFQ13129 1914 aa14.93□□□□□ -0.02
SMARCC1-201ENST00000254480 C2orf82Q6UX34 121 aa14.93□□□□□ -0.02
SMARCC1-201ENST00000254480 WT1-ASQ06250 92 aa14.93□□□□□ -0.02
SMARCC1-201ENST00000254480 GHRHP01286 108 aa14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 RNASE13Q5GAN3 156 aaKnown RBP14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 LEPROTO15243 131 aa14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 GAGE6Q13070 117 aa14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 ANXA2RQ3ZCQ2 193 aa14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 PRSS57Q6UWY2 283 aa14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 SPRY2O43597 315 aa14.92□□□□□ -0.02
SMARCC1-201ENST00000254480 WT1P19544 449 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms