RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 RASL11AQ6T310 242 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 SHANK2-AS3Q9BTD1 123 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 PRSS22Q9GZN4 317 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 TRAV12-3A0A0B4J271 114 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 MINOS1Q5TGZ0 78 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 BCL6BQ8N143 479 aaPredicted RBP13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 MRPL27Q9P0M9 148 aaKnown RBP13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 Q6ZWC4 215 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 IGHV2-70P01814 119 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 PLA2G2CQ5R387 149 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 ZNF562Q6V9R5 426 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 V9GYV3 84 aa13.76□□□□□ -0.21
SLC1A4-201ENST00000234256 ANKRD11Q6UB99 2663 aaPredicted RBP13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 TMEM8BA6NDV4 472 aa13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 TMEM158Q8WZ71 300 aa13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 C2orf88Q9BSF0 95 aa13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 CEACAM8P31997 349 aaPredicted RBP13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 ORMDL2Q53FV1 153 aa13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 LYPD6BQ8NI32 183 aa13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 CHTOPQ9Y3Y2 248 aaKnown RBP13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
SLC1A4-201ENST00000234256 Q0VG73 95 aa13.74□□□□□ -0.21
SLC1A4-201ENST00000234256 COL4A4P53420 1690 aaPredicted RBP13.74□□□□□ -0.21
SLC1A4-201ENST00000234256 TRAV2A0A0B4J234 112 aa13.74□□□□□ -0.21
SLC1A4-201ENST00000234256 OVOL3O00110 214 aa13.74□□□□□ -0.21
SLC1A4-201ENST00000234256 MAPK1IP1LQ8NDC0 245 aa13.74□□□□□ -0.21
SLC1A4-201ENST00000234256 HTN3P15516 51 aa13.74□□□□□ -0.21
SLC1A4-201ENST00000234256 RUSC1-AS1Q66K80 236 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 OOSP1A8MZH6 123 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 M0R1W7 72 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 OVOL1O14753 267 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 RIPPLY3P57055 190 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 ZNF479Q96JC4 524 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 SSBP2P81877 361 aaPredicted RBP13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 LAGE3Q14657 143 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 ZNF833PQ6ZTB9 187 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 SLC25A2Q9BXI2 301 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 ATP6V0E1O15342 81 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 C8orf49Q96NF6 230 aa13.73□□□□□ -0.21
SLC1A4-201ENST00000234256 CHD8Q9HCK8 2581 aa13.72□□□□□ -0.21
SLC1A4-201ENST00000234256 NDUFS7O75251 213 aa13.72□□□□□ -0.21
SLC1A4-201ENST00000234256 HSD52Q0P140 79 aa13.72□□□□□ -0.21
SLC1A4-201ENST00000234256 ZNF876PQ49A33 203 aa13.72□□□□□ -0.21
SLC1A4-201ENST00000234256 RHPN1-AS1Q9BWJ2 59 aa13.72□□□□□ -0.21
SLC1A4-201ENST00000234256 DSCAML1Q8TD84 2053 aa13.72□□□□□ -0.21
SLC1A4-201ENST00000234256 YPEL3P61236 119 aaPredicted RBP13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 PRR20EP86478 221 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 PRR20CP86479 221 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 PRR20DP86480 221 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 PRR20BP86481 221 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 PRR20AP86496 221 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 C3orf36Q3SXR2 165 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 LYPD1Q8N2G4 141 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 A0A087WWL8 130 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 DNAL4O96015 105 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 PLA2G5P39877 138 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 TDGF1P3P51864 188 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 SEC11AP67812 179 aa13.71□□□□□ -0.21
SLC1A4-201ENST00000234256 Q8TCH9 128 aa13.71□□□□□ -0.22
SLC1A4-201ENST00000234256 TRBV19A0A075B6N1 114 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 RCHY1Q96PM5 261 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 TTC32Q5I0X7 151 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 SAMD5Q5TGI4 173 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 IGFL3Q6UXB1 125 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 C9orf139Q6ZV77 190 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 YAE1D1Q9NRH1 226 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 SPTBN4Q9H254 2564 aa13.7□□□□□ -0.22
SLC1A4-201ENST00000234256 CD28P10747 220 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 GRNP28799 593 aaKnown RBP13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 K7ENP7 123 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 STHQ8IWL8 128 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 ABCA12Q86UK0 2595 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 K7EN84 100 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 CTSZQ9UBR2 303 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 SCGB1A1P11684 91 aa13.69□□□□□ -0.22
SLC1A4-201ENST00000234256 A0A1W2PNU3 283 aaPredicted RBP13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 DUSP14O95147 198 aaKnown RBP13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 C20orf144Q9BQM9 153 aa13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 TMEM101Q96IK0 257 aa13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 DKK4Q9UBT3 224 aa13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 HOXA3O43365 443 aaPredicted RBP13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 IGLC1P0CG04 106 aa13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 TMEM75Q8N9X5 138 aa13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 OR9G4Q8NGQ1 327 aa13.68□□□□□ -0.22
SLC1A4-201ENST00000234256 IGHV4-39P01824 125 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 NPC2P61916 151 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 TEX36Q5VZQ5 186 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 LCNL1Q6ZST4 164 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 CSTL1Q9H114 145 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 B4DSR2 109 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 TNFRSF6BO95407 300 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 IGLC2P0DOY2 106 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 IGLC3P0DOY3 106 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 PRSS57Q6UWY2 283 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
SLC1A4-201ENST00000234256 C2orf16Q68DN1 1984 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms