RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 Q8TCH9 128 aa4.34□□□□□ -1.71
KRR1-201ENST00000229214 MBD3L4A6NDZ8 208 aaPredicted RBP4.34□□□□□ -1.72
KRR1-201ENST00000229214 MBD3L3A6NE82 208 aaPredicted RBP4.34□□□□□ -1.72
KRR1-201ENST00000229214 MBD3L5A6NJ08 208 aaPredicted RBP4.34□□□□□ -1.72
KRR1-201ENST00000229214 IGHG3P01860 377 aa4.34□□□□□ -1.72
KRR1-201ENST00000229214 MBD3L2Q8NHZ7 208 aaPredicted RBP4.34□□□□□ -1.72
KRR1-201ENST00000229214 IGKV3D-11A0A0A0MRZ8 115 aa4.34□□□□□ -1.72
KRR1-201ENST00000229214 TRAV8-1A0A0A6YYK1 113 aa4.34□□□□□ -1.72
KRR1-201ENST00000229214 PLA2G10O15496 165 aa4.34□□□□□ -1.72
KRR1-201ENST00000229214 SPATA46Q5T0L3 261 aa4.34□□□□□ -1.72
KRR1-201ENST00000229214 C15orf53Q8NAA6 179 aa4.34□□□□□ -1.72
KRR1-201ENST00000229214 LINC00474Q9P2X8 69 aa4.34□□□□□ -1.72
KRR1-201ENST00000229214 NTN3O00634 580 aaPredicted RBP4.33□□□□□ -1.72
KRR1-201ENST00000229214 SPINK14Q6IE38 97 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 FAAP20Q6NZ36 180 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 GAGE7O76087 117 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 GAGE12FP0CL80 117 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 GAGE12GP0CL81 117 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 GAGE12IP0CL82 117 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 GAGE4Q13068 117 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 C1QL3Q5VWW1 255 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 ERVH48-1M5A8F1 160 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 ETV2O00321 342 aaPredicted RBP4.33□□□□□ -1.72
KRR1-201ENST00000229214 ADMP35318 185 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 CCL8P80075 99 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 C7orf69Q9H7B7 122 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 SIGLEC8Q9NYZ4 499 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 ORMDL1Q9P0S3 153 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 NOTCH1P46531 2555 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 CD300EQ496F6 205 aaPredicted RBP4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIGD2BQ4VC39 106 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 FAM74A4Q5TZK3 123 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 PRSS41Q7RTY9 318 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 NFE4Q86UQ8 179 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 Q8N1Y9 231 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
KRR1-201ENST00000229214 AKAP13Q12802 2813 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 A0A0J9YW62 118 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 SYS1-DBNDD2H3BUS1 97 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 NMSQ5H8A3 153 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 LHFPL1Q86WI0 220 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 FAM60AQ9NP50 221 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 C2CD4DB7Z1M9 353 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 UBE2DNLQ8IWF7 75 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 TSSC4Q9Y5U2 329 aaPredicted RBP4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BKO60814 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BJP06899 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BOP23527 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BBP33778 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BDP58876 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BCP62807 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST2H2BEQ16778 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.33□□□□□ -1.72
KRR1-201ENST00000229214 C9orf153Q5TBE3 101 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 FOXI2Q6ZQN5 318 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BHQ93079 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 SPACA5Q96QH8 159 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BNQ99877 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 HIST1H2BMQ99879 126 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 IL17BQ9UHF5 180 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 PSG8Q9UQ74 426 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 COX6A1P12074 109 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 CDAP32320 146 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 ACTL10Q5JWF8 245 aa4.33□□□□□ -1.72
KRR1-201ENST00000229214 ZNF706Q9Y5V0 76 aaPredicted RBP4.33□□□□□ -1.72
KRR1-201ENST00000229214 RNF224P0DH78 156 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 H3BMG7 143 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 COA6Q5JTJ3 125 aaKnown RBP4.32□□□□□ -1.72
KRR1-201ENST00000229214 ZCCHC24Q8N2G6 241 aaKnown RBP4.32□□□□□ -1.72
KRR1-201ENST00000229214 A0A1W2PRD5 423 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 PRR19A6NJB7 356 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 KNCNA6PVL3 124 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 CDPF1Q6NVV7 123 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 C8orf44Q96CB5 159 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 PLPPR2Q96GM1 343 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 CRIM1Q9NZV1 1036 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 CHCHD2Q9Y6H1 151 aaPredicted RBP4.32□□□□□ -1.72
KRR1-201ENST00000229214 TRAV4A0A0B4J268 109 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 FOXS1O43638 330 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 LYPD3O95274 346 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 ZNF79Q15937 498 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 PIGYQ3MUY2 71 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 LINC01590Q5TEZ4 76 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 ZNF826PQ6ZT77 177 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 PLAC1Q9HBJ0 212 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 CD55P08174 381 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 PTGER1P34995 402 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 MRPL36Q9P0J6 103 aaKnown RBP4.32□□□□□ -1.72
KRR1-201ENST00000229214 COL4A6Q14031 1691 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 C9JAW5 83 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 IGKV3-15P01624 115 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 WDR86Q86TI4 376 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 OR11H7Q8NGC8 314 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 C11orf52Q96A22 123 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 TMEM14BQ9NUH8 114 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 RPL23P62829 140 aaKnown RBP4.32□□□□□ -1.72
KRR1-201ENST00000229214 C15orf32Q32M92 178 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 TPTE2P1Q5T6R2 138 aa4.32□□□□□ -1.72
KRR1-201ENST00000229214 GAGE2AQ6NT46 116 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms