RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 J3QLI3 93 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 NPFFO15130 113 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 SNAPINO95295 136 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 IGLV2-23P01705 113 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 OPN1MWP04001 364 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 MSMBP08118 114 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 OPN1MW2P0DN77 364 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 OPN1MW3P0DN78 364 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 OR13C7P0DN81 318 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 DEFA4P12838 97 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 M6PRP20645 277 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 S100A7P31151 101 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 CDC34P49427 236 aaPredicted RBP3.57□□□□□ -1.84
VPS29-212ENST00000621131 PSMB3P49720 205 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 TAS2R45P59539 299 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 BPIFB3P59826 476 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 B2MP61769 119 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 RHOBP62745 196 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 DEFA5Q01523 94 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 DIAPH2-AS1Q14236 149 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 SSX2Q16385 188 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 GUK1Q16774 197 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 UTF1Q5T230 341 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 SLC16A13Q7RTY0 426 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 TMEM144Q7Z5S9 345 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 IQCF2Q8IXL9 164 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 SVBPQ8N300 66 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 TEX29Q8N6K0 151 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 OR10G4Q8NGN3 311 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 OR10G9Q8NGN4 311 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 OR1L4Q8NGR5 311 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 SFT2D1Q8WV19 159 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 CACNG8Q8WXS5 425 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 PFDN5Q99471 154 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 C19orf24Q9BVV8 132 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 REG4Q9BYZ8 158 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 MAP1LC3BQ9GZQ8 125 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 WNK1Q9H4A3 2382 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
VPS29-212ENST00000621131 MANBALQ9NQG1 85 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 THYN1Q9P016 225 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 SIGLEC9Q9Y336 463 aa3.57□□□□□ -1.84
VPS29-212ENST00000621131 ANK3Q12955 4377 aaKnown RBP3.56□□□□□ -1.84
VPS29-212ENST00000621131 TRRAPQ9Y4A5 3859 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 TRAV1-1A0A0B4J248 108 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 IGHV1-69DA0A0B4J2H0 117 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 A0A1B0GV50 99 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 A0A1B0GW64 132 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 FAM168BA1KXE4 195 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 TMEM218A2RU14 115 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 RBFOX3A6NFN3 312 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 RNASEK-C17orf49H0YIS7 233 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 AGPAT2O15120 278 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 HMGB3O15347 200 aaKnown RBP3.56□□□□□ -1.84
VPS29-212ENST00000621131 NDUFA3O95167 84 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 CXorf1O96002 111 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 IGHV1-69P01742 117 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 APOC3P02656 99 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 SFTA3P0C7M3 94 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 RNASE2P10153 161 aaKnown RBP3.56□□□□□ -1.84
VPS29-212ENST00000621131 HIST1H1BP16401 226 aaKnown RBP3.56□□□□□ -1.84
VPS29-212ENST00000621131 SAA4P35542 130 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 SELENOTP62341 195 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 DEFB113Q30KQ7 82 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 KHDC3LQ587J8 217 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 BPIFCQ8NFQ6 507 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 NPBQ8NG41 125 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 OR1P1Q8NH06 330 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 LYPD6BQ8NI32 183 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 SRSF12Q8WXF0 261 aaKnown RBP3.56□□□□□ -1.84
VPS29-212ENST00000621131 P2RX4Q99571 388 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 TXNDC17Q9BRA2 123 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 SEC11CQ9BY50 192 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 MRPL32Q9BYC8 188 aaKnown RBP3.56□□□□□ -1.84
VPS29-212ENST00000621131 SLC35B3Q9H1N7 401 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 FBXL15Q9H469 300 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 PITPNC1Q9UKF7 332 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 RNF24Q9Y225 148 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 PXMP4Q9Y6I8 212 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 ARID1AO14497 2285 aa3.56□□□□□ -1.84
VPS29-212ENST00000621131 RYR3Q15413 4870 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 TRAV30A0A087WSZ9 112 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 TRAV40A0A0B4J280 105 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 ZFP92A6NM28 416 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 PRSS46E5RG02 174 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 M0QZK8 103 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 COX7A2P2O60397 106 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 HSPB1P04792 205 aaKnown RBP3.55□□□□□ -1.84
VPS29-212ENST00000621131 CRYGBP07316 175 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 FBP1P09467 338 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 BCL2P10415 239 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 RPL29P47914 159 aaKnown RBP3.55□□□□□ -1.84
VPS29-212ENST00000621131 DLX1P56177 255 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 PAX2Q02962 417 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 PRB3Q04118 309 aaPredicted RBP3.55□□□□□ -1.84
VPS29-212ENST00000621131 LOXL1Q08397 574 aaPredicted RBP3.55□□□□□ -1.84
VPS29-212ENST00000621131 EBI3Q14213 229 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 FXYD3Q14802 87 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 C5orf64Q2M2E5 130 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 BSXQ3C1V8 233 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms